Entry |
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Name |
(GenBank) DNA gyrase subunit B
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KO |
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Organism |
fso Candidatus Fokinia solitaria
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Brite |
KEGG Orthology (KO) [BR:fso00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:fso03032]
Fsol_00277
03400 DNA repair and recombination proteins [BR:fso03400]
Fsol_00277
Enzymes [BR:fso01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Fsol_00277
DNA replication proteins [BR:fso03032]
Prokaryotic type
DNA Topoisomerases
Fsol_00277
DNA repair and recombination proteins [BR:fso03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Fsol_00277
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
295512..298046
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AA seq |
844 aa
MTKKYDASSIQVLEGLDAVKKRPGMYIGDVSSSLGLHNMLNEVLDNAVDECIAGYAKNIS
ISLNSDGSASVEDDGRGIPVDVYEGEGVSAAEVIMTKLHAGGKFDSDAYKMSGGLHGVGV
SVVNALSEWLLLTVWRDNEYEILFEEGRTVSPLKVNATNVKKCGTRVTFLPSRGVFAVVE
FDYNYIEQRIRELAFLNPSASFIIRDYRKDEPFEKTFCFAGGVKEFVAYLDRAKNKLHDI
IDIQGQSDDVIVNVSLAWNDGYAENVMCFTNNIRQRDGGTHLAGFRSAITRAVTAYVNTV
KHKKYEKLEVSPDDIREGLTAVLSIKVHEPIFSSQTKEKLASGNVKSAVEQVVFSNIERW
FEQNPNSAKAIANKILDSAIAREAARKARDLSRKKPGFEISVLAGRLASCQEKDPSLCEL
FIVEGESAGGSAKQGRDRATQAVLPLRGKVLNVERARIDKVLSHSEIGTLVSALGTGIGR
DILDVSKLRYHKIILMTDADVDGAHIRTLLITFFFRYMYSIIEEGHLYIAEPPLYKVRKG
QSEKYIKDERELKVFLMSIVSDDVFAILKGEVSRGYILERLEAISSFSEYINHRENVLYK
RLAEICIFTDDFLNEDHEMSSADFNISVAQKIVKLWPHGWGLLKDTGKVQVQKSENTRES
DAADESGEEHEKVESFFSDSVSEGTKTVINWSISEESKKIKFSLEEENSTSVCEIDFAAL
KKDIKSSTIRSVLEFYSAINFKISNTLTIKGNTIKFILPSALFSYLLDTARKGMYIQRFK
GLGEMNPEQLWETTLDPKNRILKRITVDDFVQADQTFSMLMGDVVGPRREFIEQDALNVK
ELDV |
NT seq |
2535 nt +upstreamnt +downstreamnt
atgacgaagaaatatgatgcctcgtccatccaagttttggaaggactggacgccgttaaa
aaaagaccaggaatgtatattggagatgtaagctcttcattagggctacacaatatgtta
aatgaagttctggataatgcagttgatgagtgtattgctggatacgcaaaaaatatctca
atctctttgaatagtgatggttcagcgagtgtagaggatgatggtagaggaatacccgta
gatgtatacgaaggagagggagtttctgcagctgaggttataatgacaaaattgcatgct
ggtggaaagtttgacagcgatgcatacaaaatgtccggtggtcttcatggagttggagta
tctgtggtaaatgcattatcagagtggcttttattaactgtatggagagataatgagtat
gagattctctttgaagaaggtagaacggtaagccctctaaaagtaaatgctacaaatgtt
aagaaatgcggtactagagtgacttttcttccttctagaggagttttcgcagtagtagaa
tttgattataattatatagagcaaagaataagagagcttgctttccttaatccaagtgct
tcttttataataagagactatagaaaagatgagccatttgagaagactttctgctttgca
ggaggcgtgaaggaatttgtcgcttatttggatagagcgaaaaataagctacacgatata
atcgacattcaggggcaaagtgatgatgtaatagtaaatgtaagcctcgcatggaatgat
ggctatgcagaaaatgtgatgtgcttcacaaataatataaggcaaagagatggaggaact
catcttgcaggctttagaagtgctattacaagagctgtaactgcatatgttaatacagtg
aagcataaaaaatacgaaaaattggaagtatcaccggatgatataagagaaggactgaca
gctgtattatccataaaagttcatgagccgatattttcatctcagacaaaggaaaaatta
gcaagcggtaacgtaaaaagcgccgtagagcaggttgtgttttctaatattgaaagatgg
tttgagcagaatccgaattctgcaaaagctattgcgaataagatattagattctgctata
gcaagagaagcagcgagaaaagcacgagatttaagtaggaaaaagcctggatttgaaata
tctgttcttgcggggaggttggctagctgtcaagaaaaggatccttcgttatgcgagtta
tttatagttgagggagaatctgcaggtggttcagcgaagcaagggcgcgatagagctaca
caagctgtactgccattgagaggaaaagttcttaatgtagagagagcgagaatagataaa
gtattatctcattcggaaattggtactcttgtaagtgcgcttggtaccggaatagggaga
gatattttagatgtatcaaaattaagatatcataagataatactgatgacagatgctgat
gtagatggcgcgcacattagaactctactcattacgttctttttcagatatatgtactct
attatagaagaagggcatctatacatcgcagagcctccgttgtataaagtacgaaaaggg
caaagtgagaagtacatcaaagatgaacgtgagttaaaagtatttttgatgtccatagta
tcagatgatgtatttgcaattctaaaaggagaagtatcacgaggatatattttagagaga
ttggaagctattagcagtttttcagagtatattaatcacagagaaaatgttttatataag
agattagctgaaatttgcatatttacagatgatttccttaatgaagatcatgaaatgtct
agtgcggattttaatatctcagtagcgcaaaaaatagtgaaattatggcctcacggatgg
ggactccttaaagatactggtaaagtgcaagttcaaaaatccgaaaatacaagagaatct
gatgctgctgatgagtctggtgaagagcacgaaaaagtggaaagttttttctcagatagt
gtcagtgaaggcactaaaacagtaataaattggagtatttctgaagaatctaaaaagata
aagttttcattagaagaggagaatagtacttcagtgtgtgagattgatttcgcagctcta
aaaaaagatataaaaagttccacaatacggagtgttttagaattttattcagctataaat
tttaaaataagcaatactcttacgataaaaggcaatacgattaaatttattttaccatca
gctttattttcttacctcttagataccgcgagaaaaggtatgtatatccagcgatttaaa
ggattaggagaaatgaatccagaacagttatgggaaacaactcttgatccgaaaaataga
attttgaagcggattactgtagatgattttgtgcaggctgatcaaacattttcaatgctt
atgggagatgtagttggtcctagaagagagttcatagagcaggatgcattaaatgttaaa
gagttggatgtgtag |