KEGG   Candidatus Fokinia solitaria: Fsol_00284
Entry
Fsol_00284        CDS       T05415                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
fso  Candidatus Fokinia solitaria
Brite
KEGG Orthology (KO) [BR:fso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fso03032]
    Fsol_00284
   03036 Chromosome and associated proteins [BR:fso03036]
    Fsol_00284
   03400 DNA repair and recombination proteins [BR:fso03400]
    Fsol_00284
DNA replication proteins [BR:fso03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Fsol_00284
Chromosome and associated proteins [BR:fso03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Fsol_00284
DNA repair and recombination proteins [BR:fso03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Fsol_00284
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: AWD33083
UniProt: A0A2U8BS02
LinkDB
Position
complement(303403..303678)
AA seq 91 aa
MNKTDLIAELASANNITKVQASAFLDSLLDIWKDALKRKEEVKMLGFGSFFVKFSKSRMV
NNPRTGEAMEIPSMHRVKFAPGKALQDIINE
NT seq 276 nt   +upstreamnt  +downstreamnt
gtgaataagactgatcttattgcagaattagcctctgctaacaacataacgaaagtacaa
gctagcgcattcttggattcgttattggatatatggaaggatgctttaaaacggaaagaa
gaagtaaaaatgcttggatttggttcattcttcgtaaaattttccaaaagtcgtatggtg
aacaatcctagaactggcgaagcaatggagattccttcaatgcatcgcgtaaaatttgct
cctggaaaagctctccaagacataattaatgaataa

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