Candidatus Fokinia solitaria: Fsol_00349
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Entry
Fsol_00349 CDS
T05415
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fso
Candidatus Fokinia solitaria
Brite
KEGG Orthology (KO) [BR:
fso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fso03016
]
Fsol_00349
Enzymes [BR:
fso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Fsol_00349
Transfer RNA biogenesis [BR:
fso03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Fsol_00349
Prokaryotic type
Fsol_00349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
Motif
Other DBs
NCBI-ProteinID:
AWD33147
UniProt:
A0A2U8BS31
LinkDB
All DBs
Position
complement(371286..372047)
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AA seq
253 aa
AA seq
DB search
MLYRYKMKLEYDGTKFIGWQKQPSSHGISVQQKLEDTLLAVLSKNISLFVAGRTDSGVHA
INQVAHFDTDILLKLKKICTTLNYFLKNTGIIVLSIENVDLSFDARLSAKQRIYCYNILN
RDAPTALFYGRVWHIFNLELNVSAMMEAATILVGTHDFTAFRSPRCQAKSPIRTIDYINI
SESNFPLEKTISIEFGAKSFLHNQVRLLVGGLFCVGAGKWDITKLLTVLESKSRKECHVM
APPHGLYLKKILY
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgctatatagatacaagatgaagttagaatatgatggcaccaaatttataggatggcaa
aaacaaccatcttctcatggtataagtgtgcaacaaaaattagaagatactcttttagct
gttctttcgaaaaatatatcattatttgttgctggacgtactgatagcggagtacacgct
atcaaccaagtggcgcattttgatactgatatacttttaaagctgaaaaaaatttgcaca
actctaaactattttttaaaaaacacaggtataatagtactcagtatagagaatgttgat
ctttcttttgatgcaagactttctgctaaacaacgcatatattgctataatatattgaat
cgcgatgcacctaccgcattattttacggaagagtatggcatatttttaaccttgagtta
aatgtatctgcaatgatggaagcagccactatacttgtaggcactcacgactttaccgct
tttcgctctccaagatgccaagcaaaatctcctataaggactatcgattacatcaacatc
tcagaatctaactttccgctagaaaaaactattagtatagaatttggcgcaaaatctttt
ttacataatcaagtcagattactagtaggaggattgttctgtgtaggtgcaggaaagtgg
gatattacaaaattgctcacagttttagagagtaaatcaaggaaagaatgtcacgtgatg
gcgccgccacatggattatatcttaaaaagatactctattaa
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