Candidatus Fokinia solitaria: Fsol_00487
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Entry
Fsol_00487 CDS
T05415
Name
(GenBank) Transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
fso
Candidatus Fokinia solitaria
Brite
KEGG Orthology (KO) [BR:
fso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fso03021
]
Fsol_00487
03009 Ribosome biogenesis [BR:
fso03009
]
Fsol_00487
Transcription machinery [BR:
fso03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Fsol_00487
Ribosome biogenesis [BR:
fso03009
]
Prokaryotic type
rRNA transcription factors
Fsol_00487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_NusA_C
KH_2
KH_1
S_layer_C
Motif
Other DBs
NCBI-ProteinID:
AWD33281
UniProt:
A0A2U8BSG5
LinkDB
All DBs
Position
complement(516030..517595)
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AA seq
521 aa
AA seq
DB search
MKESGILQVIQYVSREKSMPVGLLFEMLEQTIEDVMCSKYGTHKFKCHFDRKTGQSSLYR
VTEVVSDEDAAAALQDGAVDVISISEAKKNGHTVEVGDKILEEVPMIDIEPSIISKARTA
LVSKIRKIEAERELEEYSEKIGEMFSGVVERVERAAVVIKLANGVLAVIPHNHQLRQDNF
VHGAKVKAVLVEVKQSQDEEPQLILSRTSDTFLEQLLHREVAEIYSGTIRIVKIAREAGS
RSKVVLYSSVSSINPVGACIGIKGARVKAVMAELGGEKIDFILYSDDMREMVLNAIAPVV
PQKVSFSEDEDVVKIVVGSGVVHEVIGRNGQNVRLLSMLIGMRIEVMTEQDLISDAYNKT
KKDSLILQKRLDIDMILAQVLISEKLNTVEKIAETSVSDLSVVVGEDTEIAEELISRANL
AIQLGAESYADLEEDKSSQATMSDVPGVTSDALAKEKQMMIRAFARLRLSSLARIAPYSS
DELYEMCNAKGFDIRKELLDVVVTKARQKTYFSIFKNSDAS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatccgggatattgcaggtaattcagtatgtgtcaagagaaaagagtatgcca
gtaggtctgctttttgagatgctggagcagacgatagaggatgtgatgtgcagtaaatac
ggtactcataaatttaaatgtcattttgatagaaaaacgggacagagttctctatatcga
gtgacggaagtggtaagtgatgaagatgcagcagccgcattacaagacggtgctgtagat
gtgatatcaatttctgaagctaagaaaaatggacatactgtggaggttggcgataagatt
ttagaagaggtgccaatgattgatattgagccatcaattatctctaaagcgcgtaccgct
cttgtgtcgaaaataaggaaaatagaagcagaaagagagcttgaagagtatagtgagaaa
attggagaaatgttttctggagtagtagaaagagtcgagcgtgctgcggtagtaatcaag
ttagctaatggagtgttagcagttattcctcataatcatcagctacggcaagataatttt
gtacatggtgcgaaagtaaaagctgtgttggtagaggtgaagcaatctcaagatgaagag
cctcagttaattctatcaagaacttccgatacttttctagagcagctgttgcacagagaa
gtcgcagagatttatagtggcactatacgcattgtaaagattgctagagaagcgggttct
cgttcaaaagttgtattatattctagtgtttcttctataaatccagtaggggcttgtatc
ggtataaaaggtgcgcgcgtaaaagctgtgatggctgaattaggaggagaaaagatagat
ttcatattatattcagatgatatgagagaaatggtgctgaatgcgattgcgccagttgtg
ccacaaaaagtttcttttagtgaagatgaagatgtagtgaaaattgtagtaggttctgga
gtagtgcatgaagtaataggaagaaatggtcagaatgtgaggcttttgtcaatgcttata
ggaatgagaattgaagttatgacagagcaagatttaatttcagatgcttataataaaact
aaaaaagactctttaattcttcaaaagaggttagatatagatatgatacttgcgcaggtc
ttgatatctgaaaaattgaatacagtcgagaaaattgcagaaacaagtgtgtctgattta
agtgtggtggtaggagaagatactgaaattgcagaagaattgatttctcgtgctaatttg
gcaattcagcttggcgcagagagttatgcagatcttgaggaagataaaagttctcaagct
actatgagtgatgttccaggtgttacctctgatgcgttggcaaaggagaagcagatgatg
ataagagcgttcgcgcgtcttagattaagttctttagctagaattgcaccttattctagc
gacgaattatacgagatgtgcaatgctaaagggtttgatataagaaaagagttgttagat
gttgtagtcactaaagctaggcagaagacttatttttctatttttaaaaattctgacgct
tcttaa
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