| Entry |
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
fso Candidatus Fokinia solitaria
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:fso00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fsol_00585
03430 Mismatch repair
Fsol_00585
03440 Homologous recombination
Fsol_00585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:fso03032]
Fsol_00585
03400 DNA repair and recombination proteins [BR:fso03400]
Fsol_00585
Enzymes [BR:fso01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fsol_00585
DNA replication proteins [BR:fso03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Fsol_00585
DNA repair and recombination proteins [BR:fso03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Fsol_00585
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(635303..638842)
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| AA seq |
1179 aa
MFKDFYIPLRIFSSYSIGESNIRIEDVVKFCKTHKIPAFCITDRNDLFGMLECSLLAKKN
GIQYIPGLTLKVRLDEVVSDAAEIEIVLIATNERGVKNLTILSSLLYMRVEKANDETEFA
LMAIEDKVPCNLCLRQISEYCEGLIVLWGTADKDFLCRLNSTNEELQATIGNIITQLKAS
LSSAELYIEISRVEDNIFYTAESAFIAFCSLNHIPIVASCIATHMSVSDAEACDVMMCIS
NGTYIATKDRKAVQKGEFLRTYDEFQSLFADLPKAVENTIALARKCSFMPQSSSPRLPTF
ASRAQEDLILRQRTLKGLEEKVEKMTEETKMLYFERLQRELDVICSMGFSGYFLVVSDFI
RWSRDNDIAVGPGRGSAVGSIVAWVLNITALDPIKFNLLFERFLNPARISMPDIDVDFCQ
LGRDRVIEYVKKKYGSDRVAHIITFGKLQPRAVLRDVGRVLQIPYRVVDRICKMIPNNPA
HPIDLATAVAIDKSLQEMSKTDDDVRRLIEIGLKLEGLHRHISMHSAGVVISDTTLLGDV
PLCKTQDSDLILVQYSMKYTELAGLVKFDFLGLKTLTVIAQTCNIIKQHRGIQIDISNLP
LTDVKTFEMLTKGLTVGVFQFEGVGMKEAIKGLKPDSIDDLIALSSLYRPGPMSNIPSYN
RRKHGLEAVEYIHPRIADVLKDTYGIIIYQEQVIEIARVIANYSLGEADLLRRAMGKKDK
NEMAKHQSTFIENAVKNGIEEKSAIEIFDTVNKFASYGFNKSHAAAYSIISYQTAYLKAH
YPIEFLCILMNLDIMQTNKLAIYCNEARLLQIQIKPPSINFSYSEFMIEGNEIRYGLEAI
KGVSSQLVKEICAEREKNGTFKSILDFIYRIKNKELNKRNMEQMIKACAFAELYPNIKEL
LENVENLIKESEYHSEMAIANLKQNSLFKKSLPKKNSIDELENFIKTSSLNDNERAMFEY
QALGFYLLHNPLQIWRLDLQRSFVSQISEIEELVFKIENEEQKDITKKVAGIITSLKVRS
SSSGKGGKFAFMQLCDETGFLDVSIFNEAILIAQKDLLAEGQIIVCNVEIRKDNFGVRIT
VESVERIDAYDKVKDYIFPITDFQSMKRLSSFLDSNRKHDGAYVRIATHDNENNVIIVWK
SKSKYDLNNENLEELKNEEIVYIRYDDEAKLCQYFFKKN |
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| NT seq |
3540 nt +upstreamnt +downstreamnt
atgtttaaagatttttatatccctcttcgaatattctcatcttactcaattggtgaaagc
aatataagaatagaagatgtagtgaaattttgtaaaacacataagataccggcgttctgt
attacagatagaaatgatttatttggaatgcttgaatgctcattgttagcgaagaaaaat
ggtattcagtatattcctggactaacattgaaagtgcgtcttgatgaagtggtatctgat
gccgcagaaatagaaattgttctcatcgctactaatgaaagaggagtaaaaaatctcacg
attctatcaagtctcttatatatgagagtagaaaaggcgaatgatgaaactgaatttgct
ttaatggcgatagaagataaagtgccatgtaatttatgtttacgtcaaattagtgaatac
tgtgagggtttaatagtactttgggggacagctgataaagattttttatgccgtttaaac
agcacaaatgaagagttgcaagcaacaatcggtaatatcattactcaattaaaagcttca
ttaagtagtgcagaactttatatagagatttcaagagttgaagataacatattttataca
gcggaaagcgcttttattgcgttttgttctctgaatcacataccgatagttgcaagttgt
attgcaactcatatgagtgtatctgatgcggaggcatgtgatgtgatgatgtgcataagt
aatggtacttatattgctacaaaagatagaaaagcagtgcaaaaaggtgaatttctcaga
acatatgatgaatttcagagtctttttgcagacttaccgaaagcagtagaaaatacaata
gcacttgcgcgaaagtgctcgtttatgccgcagtcatcttctccaagattgcctactttt
gcttcgcgtgcgcaagaagatctgatactgcgtcagagaactttaaaaggcttagaggaa
aaagtcgaaaaaatgacggaagagacaaagatgttatactttgaaaggttgcagcgtgaa
ttggatgtaatatgcagtatgggattttcggggtattttcttgtggtatcagactttatt
cgttggagtagagataatgatattgcggtaggtcctggacgtggttcagcggtaggctca
atcgtcgcttgggttttgaatattacagcattagatcctataaaatttaatcttcttttt
gaaagatttcttaatccagctcgtataagtatgccggatattgatgtagatttttgtcaa
ttaggacgtgatcgagtaatagaatacgtaaaaaaaaagtacggctctgatagagttgcg
catattatcacgtttggtaagttacagccaagagctgtactgcgagatgtagggcgtgtt
ttgcagataccttatcgtgttgtggacagaatatgtaaaatgatacctaacaatcctgcg
caccctatagatctcgctactgctgtagcaatagataaaagtctacaagagatgagtaaa
actgatgatgacgtaagaagattaatagagattggattaaaacttgagggattgcataga
catatatcgatgcatagtgcaggcgttgtgatatctgatactactctactcggtgatgta
ccgttatgtaaaacgcaggattctgatttgatactagtgcaatatagtatgaaatataca
gaattagctggtttggtaaagttcgactttttaggcttgaaaacgctaacagtgattgcg
caaacatgcaatatcataaagcagcacagaggtattcaaatagatatcagtaatttacct
cttacagatgtaaagacatttgaaatgctgacaaaaggtctgacagtaggtgtgtttcag
tttgaaggcgttggtatgaaagaagcgataaagggactgaagccagatagtatagatgat
ttgattgctttgagttcattatatagaccagggccgatgtcaaatattccatcgtataat
agaagaaagcatggattagaagcagtggagtatatacatcctaggattgctgacgtgttg
aaggatacgtacggtatcataatatatcaggagcaggtaatagaaatagcacgagtgatc
gcaaactattctctaggagaagcagatttgctgagaagagcgatgggaaaaaaggataaa
aatgaaatggcgaaacatcaaagtacttttatagaaaatgctgttaaaaatggtatcgaa
gaaaaaagtgcaatagaaattttcgatactgtcaataagttcgcgagttacggctttaat
aaatctcatgctgctgcgtattctatcatctcttatcaaactgcttatcttaaagcgcat
tatccaatcgagtttctgtgtatactgatgaatctcgatatcatgcaaaccaataagtta
gctatttattgtaatgaagcaagattgttgcaaattcaaatcaaacctccttccattaat
ttttcttattcggaatttatgatagaaggtaatgaaataaggtatggattagaagcgata
aaaggtgttagcagtcagttggtaaaagaaatatgtgcagagagggaaaaaaatggcacc
tttaaatcgatattagattttatatatagaatcaaaaataaagaactgaataagagaaat
atggagcaaatgatcaaagcatgcgcatttgctgaattatatccgaatattaaagaacta
ttggagaatgtggaaaatctcataaaggagagtgagtatcactcagaaatggcaattgct
aacttgaagcagaatagtctatttaaaaaaagcttaccaaagaaaaattcaattgatgag
ctagaaaattttatcaaaacatcttctcttaacgataatgaacgtgcaatgttcgaatat
caagcgcttggattttatttactacacaatccgcttcagatatggagattggatttgcaa
cgatcttttgtaagtcagatatcggaaatagaagaactagtatttaagatagaaaatgaa
gagcaaaaagatatcacaaaaaaagtcgcaggtatcattacatcgttgaaagtacgttcg
tctagcagtggcaaaggagggaagttcgcatttatgcagttatgtgacgaaactggcttt
cttgatgtatcgatttttaatgaagcaattttaatagcgcagaaagatctgttagccgaa
gggcagattattgtttgtaatgtggaaataagaaaagataattttggagtaaggattaca
gtagaatctgtagaaagaatagatgcttatgataaagtgaaggactatatttttcctatc
actgattttcaaagcatgaaaaggttatcatcttttttagatagtaaccgaaaacacgat
ggcgcatatgtaagaattgctacgcatgataacgaaaataacgtcatcatagtatggaaa
tcgaagtcaaagtatgatctgaataatgagaacttagaagagttaaaaaatgaagagata
gtatatattaggtatgatgatgaagcaaaactatgtcaatatttctttaaaaagaattaa |
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