Candidatus Fokinia solitaria: Fsol_00606
Help
Entry
Fsol_00606 CDS
T05415
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fso
Candidatus Fokinia solitaria
Pathway
fso03420
Nucleotide excision repair
fso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Fsol_00606
03430 Mismatch repair
Fsol_00606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fso03400
]
Fsol_00606
Enzymes [BR:
fso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Fsol_00606
DNA repair and recombination proteins [BR:
fso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fsol_00606
MMR (mismatch excision repair)
Other MMR factors
Fsol_00606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
FtsK_SpoIIIE
DEAD
Motif
Other DBs
NCBI-ProteinID:
AWD33388
UniProt:
A0A2U8BSW3
LinkDB
All DBs
Position
658195..660159
Genome browser
AA seq
654 aa
AA seq
DB search
MTSHHSEFAATQSAHKQNSLILHEEQITVSTTTERHVMVLAGPGTGKTSVIIARIQFLVQ
SYNPHEIMVLTFSTRAMSELKHRLYTAERKLMEKVWIGTFHAIGVRILKKHASTIGLSHE
FRVISEKESIHYIEELLRRTKNNVGMAYKIYEDIQRIKDKLYSTEELESQDTNAEFLFIY
QEYQNVLKLKNLVDFGDILLYVKQLFIENKEILQLLQKQFSHVIVDEYQDINFAQYYFIM
TLLQKGTNSLFCVGDDDQTIYTWRGANTERITTFKDNFPLSQTLYLSNNYRSNNDIIYHA
FKLISHNSDRCWKEMQKSSIDESDVKFSTGTTIKCYESDIIEVSHITTQITELLPYGGSI
AILVRNNEHIIPFEYSMRYNDIQYVIGNTRSFIEREEVQLALNILKLSIDPHADHNLKEL
LLLTHTLNITQINALLKIAAQSSCSLYELACNKLHSRTSSKLQAVKEIIDNISKNASLIE
DGKISDAISDSINNIGYVKTITKGKFEKLEDLYSDSFTVLSEHENEKARNLISIIEIAAQ
YKKATPLIERFSRNNHTDAQKSHEKHTVYLSTIHSSKGMEFDIVFIPFVEEGNLPYCKNY
QSENIEDERRLLYVGMTRARHKLCMSHSKCKLRSGKQIHNTPSRFIAEAELTTE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcatcattcagaattcgccgctacgcaatctgcacataaacaaaattcgctt
attctgcatgaagagcaaattacagtctctactactacggaaagacacgtaatggtgtta
gcggggccaggaacaggaaaaacatctgtaataatagcgcgtatacaatttttggtacaa
tcgtacaatcctcatgagatcatggtcttgacgtttagcacgagagcaatgagtgaacta
aagcacagattgtataccgctgaacgcaagcttatggaaaaagtatggattggtactttt
catgcaataggcgtaagaatactcaagaaacacgcttctacaattggattatctcatgaa
tttagagttatatcagaaaaagaaagcatacattacatagaagaactcttaagaagaact
aaaaataatgtaggtatggcatataaaatatatgaggatatacaacgtataaaagacaaa
ttatacagcaccgaagagttagaatctcaagatacaaatgcagaatttctttttatatat
caagaatatcagaacgttctgaaactgaaaaatcttgtagatttcggagatatcttactc
tacgtgaagcagttattcatagaaaataaagagatcttacaattgctacaaaagcaattt
tctcatgtcatagtagatgagtatcaagatatcaacttcgcacagtactatttcataatg
accttgttgcaaaaaggtacgaattcattattttgcgtaggagatgacgatcaaacgata
tatacttggagaggcgcaaacactgaacgtatcacaacattcaaagataactttccgcta
tctcagacgttatatctatcgaataattatcgctccaacaacgatataatttatcatgcc
ttcaaactgatatctcataattctgacagatgctggaaagagatgcagaaatcatctatt
gatgaaagtgatgtcaaattctctaccggtactacaataaaatgctatgaatctgatatc
atagaagtatcgcatattactactcagattacagaattattaccatatggtggtagcatt
gcaattcttgtaagaaataacgagcacatcataccttttgaatattcgatgaggtataat
gatattcagtacgttattggaaatacgagatcttttatagagagagaagaagtgcaactc
gcattaaatatactaaaattgagtattgatcctcacgctgatcataatttaaaagagttg
ctattattaactcatactctaaatattacgcagataaacgcgcttcttaaaattgcagcg
caatctagttgctcactgtatgaattagcatgtaacaagttacactcaaggacatcttct
aaattacaagcagtaaaggagataatagacaacatctccaagaatgcatctcttatagaa
gatggaaagataagtgatgcaataagcgattccatcaacaatatcggatacgtaaagact
attacaaagggaaaatttgaaaaattggaagatctttactcagactcttttacagtgcta
tcagaacacgaaaatgagaaagcgcgaaatctcataagtattatagaaattgcagcacaa
tataaaaaagcaacaccacttatagaaagattttcacgaaataaccacaccgacgcacag
aagtcgcatgaaaaacacactgtctaccttagtacgatacatagttccaaaggcatggag
tttgacatagtatttattccgtttgtagaagaaggtaacttaccatactgtaaaaattac
caatctgaaaatatagaagatgagagaaggctcttatatgtaggcatgacgcgagcacga
cataagttatgtatgtcgcactcgaaatgcaagttacgcagtggaaaacaaattcacaac
actccgtcaagatttatagcagaagccgagttaacaactgaatga
DBGET
integrated database retrieval system