Francisella salimarina: KQR59_02780
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Entry
KQR59_02780 CDS
T07516
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fsr
Francisella salimarina
Pathway
fsr03410
Base excision repair
fsr03430
Mismatch repair
fsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KQR59_02780 (recJ)
03430 Mismatch repair
KQR59_02780 (recJ)
03440 Homologous recombination
KQR59_02780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsr03400
]
KQR59_02780 (recJ)
DNA repair and recombination proteins [BR:
fsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KQR59_02780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KQR59_02780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KQR59_02780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7222
Motif
Other DBs
NCBI-ProteinID:
QWU99820
UniProt:
A0AAJ4NPM6
LinkDB
All DBs
Position
complement(556221..557963)
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AA seq
580 aa
AA seq
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MLIKQKQTNQKVLDTLISKGYDTFLSKIISSRVNNFENIDLILKGSIKDLSSPFLFKDID
KAVDRLFQALQNNEIIGLETDHDCDGQTSHAILYEALTKIFNYPKEKIRSYIGHRMQEGY
GLSESLMNRILTDRIRPSLVITADNGSTDEPRIAVLKQNGIDTIVTDHHGIPPEGPPQSA
IAILNPTQHDCNYPDKAVAGCMVAWLFMAALRRKYLQNGKSLSKSYGLSNLLDFVAIGTV
ADCVSMANSHNNRIVTKLGIEQLKNNDRLCWDFLDKEKLSSEYISFSIAPLLNSDGRVSD
ALGSVSFLLENDERKIEETYENLTKQNNQRKEIQKKLTHEAITKAHQLNDDNFSLCILLD
DGHSGIHGITASRVKEMFGKPVIIFSETQNDSNLISGSARSIDNINIKTILDTIALKSPT
LMIKYGGHKGAAGLTINKSDFDTFYDLFESEIINFVKNNNISLEPILEYDFELDENDFRL
QTLEKIESLEPFGREFEKPLFYNGFTIENLRLVGKDKNHAQLVLRYKNIPSIKAIWFNAS
DNKITKHIAIGDTIRACYELQKEEFLGQTNLSLNIKLIKK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaataaaacaaaaacaaactaaccaaaaagttttagatactttgatatcaaaaggt
tacgatacattcttatcaaaaataatctcttctagagtaaataattttgagaatattgat
cttatattgaaaggatcaatcaaagatctatcatccccctttctcttcaaagatatcgat
aaagccgtagatagactttttcaagcgttacaaaataatgaaatcattggattagaaacc
gaccatgactgtgatggccaaacatctcatgcaattttatatgaagcgctgacaaagata
tttaattaccctaaagaaaagattcgttcatatataggtcacaggatgcaggaaggatat
ggtctatcagagtctttgatgaataggatattaacagatagaattagaccaagccttgtt
ataacagctgacaatggttcaacagatgagcctaggattgcagttcttaaacaaaatgga
atagacaccattgtaacagatcaccatggtattccaccagaaggccctccgcaaagtgct
atagcgatacttaatccaactcaacatgattgtaactatccagacaaagctgtagctggc
tgtatggttgcttggctttttatggcagctcttcgtagaaaatatctgcaaaatggtaaa
tcattatctaagtcttacggattaagtaatttacttgactttgttgcaattggtacagtt
gcagactgtgttagcatggcaaatagtcacaacaaccgcattgttacaaaactaggtata
gagcaactaaagaataacgatcgtctatgttgggacttcttagataaagagaagctatca
agtgagtatattagctttagtatagctcccttgctaaatagtgatggaagagtttctgat
gcattaggatctgttagcttcttacttgaaaatgatgaacgcaaaattgaagaaacatac
gaaaacctaaccaagcaaaataaccaacgtaaagaaattcaaaaaaagcttactcatgaa
gcaataactaaagctcatcaactgaacgacgacaatttctctctgtgtatattacttgat
gatggccattctggaattcacggtataaccgcaagtagagtcaaagaaatgtttggcaaa
cctgtcattattttttctgaaacacaaaatgattccaacttaatatcaggctctgctaga
agtatagataatattaatatcaaaaccatccttgatactatagcacttaaatcacctact
ttgatgataaagtatggtggtcataaaggagctgctggcttaacaattaataaatctgat
ttcgatactttttatgatttatttgaaagtgaaattatcaatttcgttaaaaacaataat
atatctttagagcctattttagagtatgattttgagcttgacgaaaatgatttcagacta
caaactctagaaaagatagaatctcttgagccatttggtagagaatttgaaaaacctcta
ttttacaatggtttcactatagaaaatctacgtttagttggtaaagataaaaaccatgct
caactagttttacgctataaaaacattccttcaatcaaagcaatatggtttaatgcttca
gacaataaaataactaaacatatagctattggcgatactataagagcctgttatgagctc
caaaaagaagaatttctcggacagacaaacttatctctcaatattaaacttatcaaaaaa
tga
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