Francisella salimarina: KQR59_02980
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Entry
KQR59_02980 CDS
T07516
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fsr
Francisella salimarina
Pathway
fsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQR59_02980 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsr03019
]
KQR59_02980 (pnp)
03016 Transfer RNA biogenesis [BR:
fsr03016
]
KQR59_02980 (pnp)
Enzymes [BR:
fsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KQR59_02980 (pnp)
Messenger RNA biogenesis [BR:
fsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KQR59_02980 (pnp)
Transfer RNA biogenesis [BR:
fsr03016
]
Prokaryotic type
tRNA degradation factors
KQR59_02980 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
WHD_LYAR
RecX_HTH2
Motif
Other DBs
NCBI-ProteinID:
QWU99857
UniProt:
A0AAJ4NQ68
LinkDB
All DBs
Position
598595..600676
Genome browser
AA seq
693 aa
AA seq
DB search
MKIFREVFELGNKEIVLETGGMARQADGSVTVSCGNNVVLVTTVVKKSVSAGADFFPLSV
HYLEKTYAAGKIPGGFLRREGRPSEEQILISRLIDRSIRPSFPDGFFNEIQIVATVLSYD
GTFSPDMLALIGASASLAISGAPYDDIIAGVRVGYTNGKYILNPNKADLKESDLDLVVSG
TDDAILMVESEANSLPESVMLGGILYAHKHLRTIISSINKLAKVASKPRIEYTIYEINKL
LKSQIKSHFFGEIKNAYTIASKQERNIKLNEVRKNVLEHIFSSDVDGNEYTEKEILEAFH
DIEKDLVRSNILDGKPRIDGRCTETIRPINVKVGVLPGVHGSALFTRGETQALVVTTLGS
DRDAQLVESLDGMEKSRYMLHYNFPPYSVGECGMVGMAPKRREVGHANLAKRATQAVFPN
ETAYPYVVRIVSEILESNGSSSMATVCGSSLSMMDAGVPIAEPVAGIAMGLIKDGAKYAV
LSDILGDEDHLGDMDFKVAGTRYGVTALQMDIKIKGISREILEQALEQARTGRLHILGIM
NEVIREHKESVSDVAPQIHVMNINPAKIKDVVGRGGSVVKGIVEKTGAQIDTSDSGEVKI
FAKDKKSLDLAKSIVEEIVAEVEEGQIYKGKIVKLLDSGAFVNLLGSQDGYLPFSEIEQA
GMKTNSLVEGQGLEVLVQNIDRGGRVKLSLVAR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatatttagagaagtctttgaactaggtaacaaagaaatagttctagaaacaggt
ggtatggctcgtcaagcagatgggtctgtgactgtaagttgtggtaataatgttgtattg
gtaactacagtagttaaaaaatcagtatcagcaggtgctgatttctttccattgtcggta
cactatttagagaaaacatacgcagcaggtaagatacctggaggcttcttaagaagagag
ggaagaccttctgaagaacagattcttatttctagattaatagacagatctataagacca
tcatttcctgatggattttttaatgagattcaaattgtagctacagttttatcttatgat
gggacattttcaccagatatgttggcactaataggagcatctgcttctttagcaatatca
ggagcgccttatgatgatattattgctggtgtaagagttggttatactaatggtaagtat
attcttaatcctaataaagcagatttaaaagagtctgatcttgatttagtagtttctggt
actgatgatgcaatactaatggtggagtcagaagctaatagtttgccagaatctgtgatg
ctcggtggtatactatatgcacacaagcatcttagaactattattagctctattaataaa
cttgctaaagtagcttcaaagccacgtatagaatatacgatttatgagataaataagttg
ttaaaatctcagattaagtcacatttctttggtgaaatcaaaaacgcatatacaatagca
tctaagcaagagagaaatattaagcttaatgaagtaagaaaaaatgttttagaacatata
ttctcgagtgacgttgatggtaatgaatatactgaaaaagaaattttagaagctttccat
gatattgaaaaggatcttgttagatcaaatattttagatggtaagccaagaattgatgga
agatgtacggaaacaatacgacctatcaatgtgaaagttggtgtattgccaggcgtgcat
ggttcagctctatttactagaggtgagacacaggctttagtggttacaactctcggtagc
gatagagatgcccagcttgtagaatctttagatggtatggaaaaatcacgatacatgctt
cattataactttcctccatactctgtaggggagtgtggtatggtgggtatggctccgaag
cgtcgtgaagttggtcatgcaaacctagctaaacgtgcaacacaagcggtttttcctaat
gaaactgcttatccatacgtcgtaagaatagtatcggaaatattggagtcaaatggctct
agttccatggcaactgtttgtggctcatctttatctatgatggacgcaggtgtaccaata
gctgagccagttgcaggtattgctatgggtcttatcaaagatggcgcaaaatatgcagtt
ttatcagacatattaggtgatgaagatcatttgggagatatggatttcaaagttgctggt
actagatatggtgttacagcacttcagatggatatcaaaatcaaaggcatctctagagag
attcttgagcaagcacttgagcaagctagaacaggtaggttgcatatcttagggattatg
aatgaagtaataagagagcataaagaatctgtttctgatgttgctccacaaattcatgtc
atgaatataaacccagctaagataaaagatgttgttggtcgaggtggatctgttgtaaaa
ggtatcgtagaaaaaactggagctcaaattgatactagtgactctggtgaggttaaaata
tttgctaaagataaaaaatcattagatttggctaaatctatagttgaagaaattgttgct
gaagttgaagaagggcaaatttacaagggtaagattgttaagcttttagactctggcgca
tttgttaatcttcttggtagtcaagatggatatttaccattctcagaaattgaacaagct
ggtatgaaaactaattcattagtcgagggtcagggcttagaagtcttggttcaaaatata
gacagaggtggtagagttaaactttctcttgtagcgaggtaa
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