Francisella salimarina: KQR59_04210
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Entry
KQR59_04210 CDS
T07516
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fsr
Francisella salimarina
Brite
KEGG Orthology (KO) [BR:
fsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsr03016
]
KQR59_04210
Enzymes [BR:
fsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KQR59_04210
Transfer RNA biogenesis [BR:
fsr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KQR59_04210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Nop5_56-rel_N_Arc
DUF3683
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
QWV00092
UniProt:
A0AAJ4TLR8
LinkDB
All DBs
Position
complement(859612..860706)
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AA seq
364 aa
AA seq
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MIIDTNKKLEDVVKALKNAKEIAVDTEFYWMRTYYPELCLVQIATENEIFLIDTLEDLDF
SKLKDIFEDTNIQKIIHSATNDIPIIKRFFDCEVNNIFDTQLAASFLGTQSQISLKALLK
DILDIEMEKESQFSDWRKRPLSQKQFDYALKDVEHLIEIKYHLEEKLNQTDYKHYFYEEL
LEIQKTEFNTVENIHNKIGNIQKFNEKTQKNAILVAQWRESIAQQKNIPVRFIFDNKILY
AIAHKNPKSLNSFDTEELKKLKPWIKKSIITVINSKQNLEHINLEQKSGAKISTEINDKI
TIFFDNETRNFKFDASLIASRKDIRSVAYNLSIDPNYSNNKLLVGWRYEIVGKKLKEYIL
DTIK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgataatagatacaaataagaaattagaagatgttgtaaaagctctcaaaaatgcaaaa
gaaatagctgttgatacagagttttactggatgcgtacatattacccagagctttgtctt
gtacaaatagctactgaaaatgaaatcttcttgatagacacactagaagatcttgatttt
agtaaacttaaagatatttttgaggatactaatatccaaaaaataatccactcggcaaca
aatgatatcccaattataaaaagattttttgattgtgaggttaataatatttttgatact
cagcttgcggcttcatttttaggtactcaatcgcagatatctctcaaggctctactcaaa
gatatacttgatattgaaatggagaaagaatctcaattttcagactggcgtaaaagacca
ctttctcaaaagcagtttgactatgccctaaaagatgttgagcatcttatagaaatcaaa
taccatcttgaggagaaacttaatcaaactgactataaacactacttctatgaagaacta
ttagagatacaaaaaacagaatttaacactgttgagaacatccataataaaattggtaat
atacaaaagtttaatgaaaaaactcaaaaaaacgccatattggtagctcaatggcgtgaa
tctatcgctcaacaaaaaaatattcctgttagatttatttttgataataaaattctctat
gcaatagctcataaaaatcctaagtctttaaactcatttgatactgaagaactaaaaaaa
cttaagccttggatcaaaaaaagcataataacagttataaactctaaacagaatctagag
catataaacttagagcaaaaatctggagctaaaatatccaccgagataaatgacaaaata
actattttttttgataatgaaacaagaaacttcaaattcgatgcttcactaatagcatca
agaaaagatattcgctcagtagcatacaatcttagtatcgatcccaattactcgaataat
aagctattagttggttggagatatgaaatagttggtaaaaaattaaaagagtatatactt
gataccataaaataa
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