Francisella salimarina: KQR59_06970
Help
Entry
KQR59_06970 CDS
T07516
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fsr
Francisella salimarina
Pathway
fsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KQR59_06970 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsr03400
]
KQR59_06970 (recB)
Enzymes [BR:
fsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KQR59_06970 (recB)
DNA repair and recombination proteins [BR:
fsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KQR59_06970 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QWU98846
UniProt:
A0AAJ4TKL5
LinkDB
All DBs
Position
complement(1407931..1411536)
Genome browser
AA seq
1201 aa
AA seq
DB search
MTNLDANTITLQGRHIIEASAGTGKTFNITTLYIRLLLEKKLLPKDTLVMTFTKDATQEI
IGRVEAKIRDVLEDISESKEVKVSIKGRDTLIQKGDENYKHLKRSLLEIDEAAIFTIHGF
CKKVLSEQAFASGIEMDVSMEVDTSDILQKVVEDFFRKHINKNKTNFEYLQAYKLHTPDM
FLDKLRNVVRSSYELLTKQAISLDEFKILKKHQLELFLNNHDIVDDFLSKLGKGEPQGKR
VDEYHRVLEWLRLDNEDPFPDNISIITNGNKIKGAKVKPIFTGIKELRDLQEEINRTNSA
QFIKQACLQIRQDFIKAKEQKGVLDFDDLITKLCHSVKKSPDLVKTLQHQYPVALIDEFQ
DTDAEQYEILDTIYPLKNSSHSHEGGNLLTNGLNLKDTSLREYDSSSDQNDSSLLLLMIG
DPKQAIYGFRGGDIFTYLKAKDSCSNDNQWSMDTNWRSTSEMIKAYNRLFYKQDYLSEEE
GQIGANIFSDGIGYQLVKASPKANEKAKDFDDNLKPINYFYYQVAEDDNRSDIDNNLSAW
TANEIVRLLNSKKVVESDIAILVENGKQAKVIQKALQAKKLSSVYLSQRDNVYHSQEATE
ILALMEGINDLENKSMLKRALSTSLLGGRADKFISYIDENDVSAWDEEIEKAKSLRQQWH
KYGFMAFIMKVIHQNFTQRSDSKERVITNILHLAELIKVAENKYKHPNQLIKWYRQQLNS
TATSEGELRLESDDNLIKIITIHGSKGLEYSVVFIPFASYVSSKKFQVGDFSKYYDKYLK
QTVYKIGKDDSIKPQIENEVIEELMRLFYVAVTRAEHRCYIGVAKYSNSEKSPLARFLDY
QKDDDWLEKIQNITANPINQSSLIDVATSHCYESENLITNEESDHNALQNLKANDINKLA
NDNWEMLSFSKISKSKVQNTALEKENDESEDNSAQKSQQELEFRFTAPKGADIGNILHNV
LEHTNFSLGKIDDNLLQEQMDRYKVVAAEDFDKLKVWLEECLVASIPSIEIEDFSSNDIQ
YGLFDIKDKGFCLKDIPNTKTLKEAEFYFPITNEKLYKKNIIEILAEYRNQDIDYDEFAS
QKIFGMLHGFIDLIFEYDGKFYVADYKSNYLGDKLEDYNQAAMSEKNQSSFYDLQYLIYS
VALNKYLRQNIENYNYEKHFGGVYYFYLRGMKDGYGVYRARPTLEIINKIANLLNGDDYH
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgactaatctagatgcaaacacaataaccttacaaggtcgccatattatcgaggctagt
gctggtactggtaagacttttaatatcactactttgtatatcaggttattacttgaaaaa
aagctattacccaaagatacccttgtaatgacatttaccaaagatgctactcaagagatt
atcggtagagtggaagctaagattagagatgtattagaggatatttctgaaagcaaagag
gtcaaagtttctataaaaggacgagatactctgattcaaaaaggtgatgagaattataag
catctaaaaagatcattacttgagatagatgaggcagctatatttactatccatggtttt
tgtaaaaaagtcctaagtgagcaagcttttgctagtggtatcgagatggatgtctctatg
gaggtcgatacttcagatattttgcaaaaagtagtagaggatttttttagaaaacatatc
aataaaaacaaaacaaactttgaatacttgcaagcatataagctacatactccagatatg
tttttggataagctaaggaatgttgttaggtctagttatgaacttttaacgaagcaagct
ataagcttagatgaatttaaaatacttaaaaagcaccagctggaattatttttaaataat
catgatatcgtggatgatttcttatctaaattaggaaaaggcgagccacagggcaagaga
gtagatgagtatcatagagttttagaatggttgagattagataatgaagatccatttcca
gataatatatctataattacaaatggtaataagattaaaggagctaaggtaaagcctata
tttactggcattaaagaattaagagacttacaggaagaaataaatagaacaaattcagcc
caattcatcaaacaagcctgcctacaaatccgccaagattttataaaagccaaagagcaa
aaaggtgttttagactttgatgatttgattactaaactttgtcatagtgtcaaaaagtca
ccagatttagtcaagacattacaacatcaatatccagttgctcttatcgatgagtttcaa
gataccgatgctgagcagtatgagattttggatactatttatcctttgaagaatagtagt
cattcccacgaaggtgggaatcttcttaccaatggattaaatttaaaagataccagccta
cgcgagtatgacagtagctctgatcagaatgatagcagtcttctgctcctaatgatagga
gatccaaagcaagcaatttatggttttaggggtggtgatatcttcacatatctaaaagct
aaagatagttgctctaatgacaatcagtggagcatggatactaactggcgctcaactagt
gagatgataaaggcttacaatagacttttttataaacaagactatttgtcagaagaagag
ggtcaaattggagctaatatctttagtgatggtattggctatcagcttgttaaagcatca
ccaaaggcaaatgagaaagcaaaagacttcgatgataaccttaaaccaataaattatttt
tattatcaagtggcagaagatgataatagaagtgatattgataataatttatcagcatgg
actgctaatgagattgtcaggctattaaattcgaaaaaagttgtagaaagtgatatcgca
attttggtagagaatggtaagcaagcaaaggttattcaaaaagcactacaagctaagaaa
ctaagctcggtatatctaagccagcgcgataatgtctatcatagccaagaggctacggag
atattagctcttatggaaggtataaacgatcttgaaaataaatctatgctaaaaagagcg
ttatcaactagtttgcttggtggtagagctgataaatttattagttatattgatgaaaat
gatgtctcagcatgggatgaagagatagaaaaagcaaaatctctaagacaacaatggcat
aaatatggttttatggcatttattatgaaagttatacatcagaatttcactcaaagatcg
gattcaaaagaacgtgttatcacaaatattctccatttagctgagcttataaaagtagct
gagaataaatataaacacccaaatcagctaatcaaatggtatcgccaacagctaaatagt
acagctacaagtgagggcgaacttagattagagagtgatgataatctgattaagataatt
acaattcacggttcaaaagggcttgagtactcagttgtatttataccatttgcaagttat
gtaagctcaaagaaatttcaagttggtgatttctctaaatactatgataaataccttaaa
cagacagtctataaaattggtaaggatgacagtataaaaccacaaatagaaaatgaagtt
atagaggaattaatgcgcctattttatgtggctgttacacgtgcagagcatagatgttat
attggagttgcaaaatatagtaatagcgaaaaatcaccattagcaagatttttagattat
caaaaagatgatgactggttagagaaaatccaaaatataacagcaaatcctattaatcaa
agttcgcttatagatgtagccacaagtcattgttatgaaagtgagaatttaattacaaat
gaagaatccgaccataatgctttacaaaatctcaaagcaaatgatattaacaagttagca
aatgataattgggagatgctgtctttctcaaaaatatcaaagtcaaaagttcaaaatacc
gcattagaaaaagaaaacgatgagtcagaagataatagtgctcaaaaatctcagcaggaa
ttagagtttagatttacggctcccaaaggagcagatattggtaatattttgcataatgtt
ttagagcatacgaattttagcctaggcaagatagatgataatcttttacaagagcaaatg
gataggtataaagtagttgctgcagaagattttgataagcttaaagtatggttagaagaa
tgcttagtcgcgtctataccttctatagaaattgaagattttagttctaatgatattcaa
tatggcttgtttgatatcaaggataaaggcttttgtttaaaagatattccaaatacaaaa
accttaaaagaagcggagttttattttcctataacaaatgaaaaactatacaagaaaaat
attatagagattttagcagaatatcgtaatcaagatattgattatgatgaatttgcaagt
caaaagatttttggtatgcttcatggttttattgatttgatttttgaatatgatggtaaa
ttttatgtggcagattataagtcaaattatctaggtgataaattagaagattataatcaa
gctgctatgagtgagaaaaatcaaagtagcttttatgatttacaatatctaatatatagc
gttgccttgaataagtacctgcgacaaaacattgaaaattataattatgaaaagcatttt
ggtggagtatattatttctatcttagaggtatgaaagatggttatggggtttatcgagct
agaccaactttagagattattaacaaaattgctaatctacttaatggggatgactatcat
gtataa
DBGET
integrated database retrieval system
