Francisella salimarina: KQR59_08385
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Entry
KQR59_08385 CDS
T07516
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fsr
Francisella salimarina
Pathway
fsr03420
Nucleotide excision repair
fsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KQR59_08385
03430 Mismatch repair
KQR59_08385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsr03400
]
KQR59_08385
Enzymes [BR:
fsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQR59_08385
DNA repair and recombination proteins [BR:
fsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQR59_08385
MMR (mismatch excision repair)
Other MMR factors
KQR59_08385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
AAA_11
CarD_TRCF_RID
DUF4252
Motif
Other DBs
NCBI-ProteinID:
QWU99104
UniProt:
A0AAJ4TKW1
LinkDB
All DBs
Position
complement(1702895..1705123)
Genome browser
AA seq
742 aa
AA seq
DB search
MSNKDFLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQYDINYAHIYTAYEERLLL
DNALDFADLLLYLYELFSLNQQLREYYQSLFKYILIDEFQDTNQVQYVWLKLLVTDNNYM
MAVGDDDQSIYGWRGAVVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDVGVDYSDIAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTPTRGIGNKTL
DTIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKLLET
VINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEEAYTSSESKKIQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKLTVG
SQNKPKLKQKSNFGVSPFDFLKSNDTKGNKFKKGDKVFHKVFGKGIFVKAQSQGSKEFYT
VDFGTDVGQKILLADIANLVKL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagactttctttcagggttaaatccccaacaaaaaaaagcgaccttgcta
gaggatcgtaattctttgatacttgctggagccggtagtggcaaaacaaaagttttaact
tctcgtatagcctatctttgtcgtgataaaggagtatctgttgaaaatattctagctgta
acatttacaaacaaagcagctaaagaaatccagcatcgagttgagaaaatgcttggtatt
tcaacttttggtatgtggataggtacttttcacggtattgctcatagattattacgtaag
catgctcatgagttgggcttagataagaactttaggattcttgatcaagatgagcaagct
caattaatcaaaaaagtaattaagagtttggatcttgatgacaaaaaatatccaccaaaa
ttattgcaaaactttattaataaacaaaaagataaggctgttcgtagtaacaaattaaca
aagcagtatgatattaattatgctcatatttatacagcttatgaagagaggttgctgtta
gataatgctttagattttgccgacttacttttgtatttatatgaattgttttctcttaac
caacagcttagagaatactatcagagtttattcaagtatattttgatagacgagtttcag
gatactaaccaagtccaatatgtgtggttgaagttacttgttacagataataactacatg
atggctgttggtgatgatgatcagtcaatatatggttggcgcggagccgttgttgataat
attcacaaatatgtcgcagatctaaatgatgttgaaatcataaagttagagcaaaattat
cgttcaacgaagaatattcttaaagtagccaattctgtaatcaaaaataatgataataga
atgtcaaaagaactatggtctgctgctgaagatggcgaaaaagttgaagtgtattgtgca
gttaatgagcgggatgaagcgaagtatattatagataaaattcgccagttacatgatgtt
ggagtcgattactctgatatagcaattttatatcgctcaaactacttgtcgcgtgtcctt
gaggagagttgtatttatgcaagtataccttataggatttatggaggttttcgtttcttt
gatcgagctgaagttaaggatgccctagcatatttaagattagctgttacaagtaatgat
aacttagcatttgagagaattattaatactccaacacgaggaattggcaacaaaacttta
gatacaattcgtaatttctcacagattaataatgtgtcatattggcaagccactatagat
attatccagaaagaaattgtaacaaaaagaaccgcatctcttctgttaaagtttatagaa
attataaatgctatttcatcacaaataaaagacttaagtctagataagcttcttgaaact
gtaatcaatgaaagtggtttgttggcatcatatcaagaaaaagatactgaaaaagatcgt
caaaaaattgataacttaaaagagttaataagtgcagctaaagattttgaaccgcagata
gagttacttgatgataatactgatatactacaagattttttgtcttttgcagtgctagaa
gctggtgagatgcaggctgatgaaaatacagatagtgttcagctaatgacaatacatgcg
tcaaaaggtttagaatttcgctatgttttcttagtagcagcagaagaaggggtatttcct
cctagctcgattattaatgctgaagaggcatatactagttcagaatctaaaaaaatccaa
gaaaagctagctgaagagagacgtttattttatgttgctgttacaagagctatgaaggct
ctaaccattagctatgctcaagtgcgtaatatctttggtagaagtagtttccaagtcaaa
tcacgctttctgatggaaatagactctgaacatattaatgagggtaaactaactgtagga
tctcaaaataaaccaaagttaaagcaaaaatcaaattttggtgtatctccttttgacttt
cttaagtcaaatgatacaaaaggtaataagttcaaaaagggagataaggtgttccataaa
gtctttggtaaggggatttttgtcaaagcacaatctcaaggttcaaaagagttttatact
gtggactttggtacagatgttggtcagaaaatactgttagcagatattgcaaatctagtt
aagctttaa
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