Ferrigenium straubiae: ACRRNM_03120
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Entry
ACRRNM_03120 CDS
T11681
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fst Ferrigenium straubiae
Pathway
fst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACRRNM_03120 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fst03021
]
ACRRNM_03120 (rho)
03019 Messenger RNA biogenesis [BR:
fst03019
]
ACRRNM_03120 (rho)
Transcription machinery [BR:
fst03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACRRNM_03120 (rho)
Messenger RNA biogenesis [BR:
fst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACRRNM_03120 (rho)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_25
S1CSD-TOTE-2
Mor
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XXM44792
LinkDB
All DBs
Position
682940..684196
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AA seq
418 aa
AA seq
DB search
MHLSDIKTKHVTELVEMAAANQIENANRMRKQDLMFALLKSQAKKGESIFGDGTLEILPD
GFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDTIDGEIRTPKDGERYVALVKVDKVN
GEPPENAKNKILFENLTPLFPTEPLRLEREIKAEENITGRIIDIVAPIGKGQRGLLVASP
KSGKTVMLQHIAHSISSNNPDATLIVLLIDERPEEVTEMTRTVRGEVVASTFDEPASRHV
QVAEMVLEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRIYPAINV
NRSGTRKEELLIKPDILQRIWLLRKLLYPMDELEAMEFLLDKIKATKNNAEFFDSMRR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctatccgacataaaaaccaaacacgtcactgaactcgttgaaatggccgcggcc
aatcagatcgagaacgcaaaccggatgcgcaagcaggacctgatgttcgccctgctgaaa
agccaggcgaaaaagggcgagagcatcttcggcgatggcacgctggaaatcctgccggat
ggcttcggcttcctgcgctcgccggacacctcctatctggcgggaccggacgacatctac
gtcagcccgagccagatccgccgtttcaacctgcacaccggcgacacaatcgacggtgag
atccgcacgccgaaggacggcgagcgctatgtcgcgctggtgaaggtggacaaggtcaac
ggcgagccacccgaaaatgccaagaacaagatcctgttcgagaacctgacgccgctgttt
ccgaccgagccgttgcgcttggagcgcgaaatcaaggccgaagagaacatcacaggccgt
atcatcgacatcgtcgcaccgatcggcaagggacagcgcgggctgctggtggcttcgccg
aagtccggcaagaccgtgatgctgcagcacatcgcgcattccatctcgtctaacaacccc
gatgcgaccctgatcgtgctgctgatcgacgaacgccccgaggaagtgaccgagatgacc
cgcaccgtgcgcggcgaagtggttgcctccaccttcgacgaaccggccagccgccacgtg
caggttgcggagatggtgctggaaaaggccaagcgcctggtcgaacacaagaaggacgtc
atcatcctgctcgactccatcacccgcttggcacgcgcctacaacaccgtggtgccctct
tccggcaaagtgctgaccggcggcgtggatgccaatgcgctgcatcgccccaagcgcttc
ttcggcgcggcgcgcaatatcgaggaaggcggctcgctaaccatcatcgccaccgcactg
gtcgatactggctcgcgcatggatgacgtgatctacgaagaattcaagggtaccggcaac
atggaaatccatctggatcgccgtatggccgagaagcgcatctacccggcgatcaacgtc
aaccgctccggcacgcgcaaggaagaactgctcatcaagccggacatcctgcagcggatc
tggctgctgcgcaaactgctctacccgatggatgagctggaagcaatggaattcctgctc
gacaagatcaaggcgaccaagaacaacgccgagttcttcgactcgatgcggcgttag
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