Fibrobacter succinogenes: Fisuc_0174
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Entry
Fisuc_0174 CDS
T01099
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu00040
Pentose and glucuronate interconversions
fsu01100
Metabolic pathways
fsu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Fisuc_0174
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Fisuc_0174
Enzymes [BR:
fsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Fisuc_0174
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
SspH
Motif
Other DBs
NCBI-ProteinID:
ACX73788
UniProt:
C9RJS5
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Position
complement(197321..199090)
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AA seq
589 aa
AA seq
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MNYLLSKTMRVAATFAALAVTTAAVPAFAVTSPDFPMAGFATQNGGTTGGKGYSEVTVDN
VNDLKSYAKAGNKIIYVKPGTYMGPVEVGSNVTIYGYQGAIIAQPASGSAMKLSGSKNVI
IRNLKFKGVGAHDDDDEDCLQVNHESKNVWIDHVDVYDGHDGNLDITNASDYVTISWTKF
SYTSASTGHQFSNLIGNSKTKTSDRGHLNVTIHHTWWADGVVERMPRVRFGKVHVANNLF
DSKNASYCVRAAVEADIRIERNVFIGVQKALDLYTSDGTITAAQMIENYEENVKKPQAGT
GTAFKPSYSMSLTDVSTQAKAYALRDSIKLYAGATLPDPGKSQTVTPASSSSEVQSSSSV
AVSSSSVAKSSSSVAQSSSSQAVSSSSQGEAVSGTATLTKHGSGSAKQEVKQGESIEEFY
FTVAGATGATVTGLPEGVSGTMKGSDFYISGTVAQNAAVGAYNFTVTTTGATTNATKNGT
ITVVGANGAVAESSSSSVESSSSKVDSSSSSEQGTTSLDVATVASHFNVSVNGRVLTVQG
ATQTAYLLDAQGRLITKVQSLGRESLITVPRAGMYLLRVGNEARRITVR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaattatttgctttctaaaacgatgcgtgtggccgcaactttcgcggctttggctgtc
acaacggctgcggttcctgcgtttgcggtgacttcgccggattttccgatggcgggtttt
gccacgcagaatggcggcactacgggcggcaagggctactccgaggttacggttgacaac
gtgaacgacctcaagagctacgccaaggcgggcaacaagattatctacgtgaagccgggt
acgtacatgggtccggtggaagtcggtagcaacgtgacgatttacggctaccagggcgcc
atcattgcgcagcccgcttcgggtagcgccatgaaactgagtggctcgaagaacgtcatc
atccgcaacctgaaattcaagggtgtgggtgcgcacgatgacgatgatgaagattgcctc
caagtgaatcacgaatccaagaacgtgtggattgaccatgtcgacgtgtatgacggtcac
gacggtaacctggacattaccaatgcttcggactacgtgacgatttcttggaccaagttc
agttacacctctgcatcgacaggtcaccagttcagcaacttgattggcaacagcaagaca
aagacgagcgaccgtgggcacctaaatgtcacgattcaccatacgtggtgggcggatggc
gtggtggaacgcatgccgcgtgtgcgttttggcaaggtacatgtggcgaacaacctcttc
gatagcaagaacgcgagctactgcgtgcgtgcggcagtagaggctgatatccgcattgaa
aggaacgtgtttatcggtgtgcagaaggcgcttgacctttacacgagcgatggaacgatc
acggcggcgcaaatgattgaaaattacgaagaaaacgtgaagaaaccgcaggccggtacg
ggcacggcgttcaagccgagttattccatgagccttacggacgtgagtacgcaggcaaag
gcttatgcccttcgtgattccattaagttgtacgcaggagcgacgctccctgatccggga
aaatctcaaacggtgacgcccgcatcttcttcgagcgaagtacagtctagttccagcgtg
gctgtgtctagttcaagtgtcgcgaaatccagtagcagtgtcgcgcagtccagctcctcg
caggctgtatctagttcctcgcagggggaggctgtttcgggaacggcgacacttactaag
cacggctcgggtagcgctaagcaagaagtcaagcaaggtgaatctatcgaagaattttac
tttactgtcgctggcgccacgggtgcgactgttacgggactgcctgaaggtgtttcagga
acaatgaagggtagtgatttttacatctcaggtacggtcgctcaaaatgctgctgtgggg
gcgtacaattttaccgtaacgacaactggggctacgacaaatgcgaccaagaacggaact
attacggttgttggtgcaaatggagcggttgcagagtctagctctagttctgttgaatca
agttctagcaaagttgattcgagctctagctcggaacaaggcacgacttcgttggatgtc
gctacggttgcttcgcatttcaatgtttctgtcaacggtcgagttcttaccgtacaaggt
gctacgcaaacggcgtatctcctggatgcccagggcaggctgattacaaaagttcagtct
ttgggtcgcgaaagcttgataaccgttcctcgtgcgggcatgtacctcttgcgagtcggt
aacgaagcgcgacgcataactgttcgataa
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