Fibrobacter succinogenes: Fisuc_0275
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Entry
Fisuc_0275 CDS
T01099
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
fsu
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fsu03009
]
Fisuc_0275
Enzymes [BR:
fsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Fisuc_0275
Ribosome biogenesis [BR:
fsu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Fisuc_0275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACX73887
UniProt:
A0ABM5LEM1
LinkDB
All DBs
Position
313366..314526
Genome browser
AA seq
386 aa
AA seq
DB search
MITRTIDRNFANMRLDRFLRKAFPEESLSVFFAVIRKKKVRVNGVVGKANQMLVEGDVVN
IYENFKSVNESDERRETKDERNINGESLPLASAAEAAPATPSSGDTPQRPDAKSATGFAK
NKSTWGRHLTGAEKQAHWGAHELDLVVQTEDYVIVNKPSGLASQPGSGTRPGESLVEYLW
EWGRNEGLDFKPTIAHRLDQETSGLIIAALHGDTLRDFTRMIREHVVDKFYFALVKGNLK
KDRGTISESLLRTDSAKGSKMLVGQDDENAQKAITHYRVKQHYEGYDLVKIKLETGRMHQ
IRAHFASIGHPLLGDTRYGDFALNREVKKLFGLNRLFLHSCRLEFDWQGEHKVFDCPLPK
ELRDVIKQLKPMRFERPENNFQRSRR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattacacgtactatcgatcgcaattttgcaaacatgcgccttgaccgtttcctccgc
aaggcattccccgaagaatcgctctcggtgttcttcgcagtcatccgcaaaaagaaagtc
cgtgtaaacggcgttgtcggcaaggctaaccagatgctcgtcgaaggcgacgtggtcaac
atttacgagaacttcaagtcggtaaacgaatcagacgagagacgagagacgaaagacgag
aggaatataaatggggaaagccttcccctcgcttccgccgccgaagcggctcccgctacc
ccttcgagcggggacaccccgcaacgccccgatgcaaaaagtgcaacaggtttcgccaag
aacaagtccacctggggccgccacctcacaggtgccgaaaagcaggcgcactggggcgct
cacgagctcgacctcgtcgtgcaaaccgaagattatgtgattgtgaacaagccctcggga
ctcgcaagccagccgggcagcggcacgcgcccaggcgaaagcctcgtggaatacctctgg
gaatggggacgtaacgaaggtctcgatttcaagccgaccatcgcccaccgcctcgaccaa
gaaacttccggcctcatcattgcagctctccacggcgacacgctccgcgacttcacccgc
atgattcgcgaacatgtcgtagacaagttctactttgcactcgtcaaggggaacctcaag
aaagaccgcggcaccatcagcgaatcgctcctgcgcacagacagcgccaagggcagcaag
atgctcgtcggtcaagatgacgaaaacgcacagaaggccatcacgcattaccgcgtcaag
caacattatgaaggctacgatcttgtgaaaatcaagctcgaaacaggccgcatgcaccag
atccgcgcccacttcgcaagcatcgggcatccgcttctcggcgatacgcgttacggcgat
ttcgcgctcaatcgcgaagtcaaaaagttgttcggtctgaaccgcttatttttgcacagc
tgtcgtctggaattcgattggcaaggcgaacataaagtttttgattgccctctccccaag
gaactccgtgacgtcatcaagcagctcaagccgatgcgctttgaacgtcctgaaaacaac
ttccaaagaagcagacgataa
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