Fibrobacter succinogenes: Fisuc_0276
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Entry
Fisuc_0276 CDS
T01099
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu03420
Nucleotide excision repair
fsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Fisuc_0276
03430 Mismatch repair
Fisuc_0276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsu03400
]
Fisuc_0276
Enzymes [BR:
fsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Fisuc_0276
DNA repair and recombination proteins [BR:
fsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fisuc_0276
MMR (mismatch excision repair)
Other MMR factors
Fisuc_0276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
CarD_TRCF_RID
PcrA_UvrD_tudor
ResIII
Amidase_3
Motif
Other DBs
NCBI-ProteinID:
ACX73888
UniProt:
C9RKG0
LinkDB
All DBs
Position
complement(314569..316980)
Genome browser
AA seq
803 aa
AA seq
DB search
MEKSPKSENIENSLEWERSRLDKEQLEAVETTEGYVRVVAGAGSGKTRTLTHRYLYLVKE
MGISPANILCVTFTNKAAAEMKKRIRSILGGDDSGYISTFHGFCVQFLREEIHVLNYPKE
FMILDEDDQKSLLRKAYADLGFSLKDLKISSVLDFVGGRKANDIGYVSLFAEHLADEVGA
SAAENAPAVENEKREHLVELADEAPDKWMAVYYRYLYEQKKNYALDFDDLILVTLYILEN
FPEKLDKWRKRMMYVMVDEYQDIDGQQYCLADLLSSYHKNLFVVGDPDQTIYGWRGADIN
RILEFDQFHKGTKTILLQNNYRSTPSILKVPDAVIKNNKYRIEKVLRPVRAGGKTPVFYH
AKNTREEAKWIVERIQNAVQNSVKNGAGGVHYKDIAVLYRMHSQSRSVEEALMSESIPYK
VYSGVGFYQRKEIKDIICYLRMLVYADDLSFIRTVNTPKRQFGPKKMAILQAFADTRKVG
LYEALLEIVYEAGRLNDVAPDVTTQAELSSVGNDHRKIDFDCKEFLSRSNVVEYVKLIEK
YRSRYKDMRVSELLSKMLRETKYEEMLRLDGDEDRLDNLAELKQGILEFENYYEEDASLD
EYLQNIVLFTNADEDSQEKDRVQLMTIHNAKGLEFPYVFVCGLNEGFFPVKRVQNKMQLE
EERRLAYVAFTRAENVLCLSDAEDGVAGESGSRYPSRFLLEMNMDELDVARGFSDDLLLA
ARAFIAESDRNRDLMNDFDEDESLGAVKKAPTAEFAVGDRVVHKIFGIGTVSGVDKKNFC
YEITFDKFATPRSIQFDFPLVRG
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagcccgaaaagcgaaaatattgaaaactcccttgaatgggagcgttcccgc
ctggacaaggagcagcttgaggcggttgagacaactgagggctacgtgcgcgtggtggct
ggggcggggtcgggtaaaactcggacgctcacgcaccgctatctgtatctcgtgaaggaa
atgggcatttcgcctgcgaatattctctgtgtgacgttcacgaacaaggcggctgccgaa
atgaaaaagcgcatccgatcgattctgggcggcgatgatagtggctacatttctacgttc
catggcttttgcgtgcagttcttgcgcgaagaaatccatgtgctgaattacccgaaggaa
ttcatgattctggacgaggatgaccagaagtcgcttttgcgcaaggcgtatgcggatttg
gggttctcgctcaaggacttgaaaatcagcagtgtccttgattttgtgggtggtcgcaag
gcgaatgatattgggtatgtgtcgctgtttgcggaacacttggcggatgaggtgggtgca
tcggctgccgagaatgcgccggcggttgaaaacgagaaacgcgagcatctggtggagctt
gcggacgaggctccggacaagtggatggcggtttattaccgctatctgtacgagcaaaag
aaaaattacgcgctcgattttgatgacttgattctggtaacgctatatattctggaaaat
ttcccggaaaagctcgacaagtggcgcaagcgcatgatgtacgtgatggtcgacgagtac
caggacattgacggtcaacagtattgtttggcggatttgctttcgagttaccacaagaac
ctgtttgtggtgggcgacccggaccagacgatttatggctggcgcggtgccgatatcaat
cgcattttggaatttgaccagttccataaaggcacgaagacgattctgttgcagaacaat
taccgctcgacgccgagcattttgaaggtgccggatgcggtcatcaaaaataacaagtac
cgaatcgagaaggtcttgaggcctgtccgtgcaggcggcaagactcccgtgttttaccat
gcaaagaacactcgcgaagaagcgaaatggattgtagaacgcatccagaatgcggtacag
aattctgtgaaaaatggtgctggtggcgtacattacaaggatattgcggttttgtaccgt
atgcattcgcagtcgcgctctgttgaagaggcgctgatgtcggagtctatcccgtataag
gtctatagcggggttggcttttaccagcgcaaggaaatcaaggatatcatttgctatttg
cgaatgctcgtgtatgccgacgacttgtcgtttatccggacggtgaatacgccaaagcgc
cagttcgggccgaagaaaatggcgattttgcaggcgtttgcggatacgcgcaaggtcggg
ctttacgaggctttgcttgaaattgtgtacgaggcggggcgcctgaacgatgtggcgcct
gatgtcacgacgcaggcggaactttcgtcggttggcaatgaccatcggaaaattgatttt
gactgcaaggaattcttgtcgagaagcaacgtcgttgaatacgtgaagttgattgaaaag
tatcgttcgcgttataaggatatgcgcgtctcggaattgctttcgaagatgcttcgcgag
acgaagtatgaggaaatgcttcgattggatggcgatgaagaccgcttggacaatctcgcg
gaactcaaacagggaattcttgaattcgagaattactacgaagaagatgcctcgcttgat
gagtatttgcaaaacatcgtgctgttcacgaatgcggatgaagattcgcaggaaaaggac
cgtgtgcagctcatgacaatccacaatgcgaagggattggaattcccgtacgtttttgtg
tgcggtttgaacgagggctttttcccggtgaagcgcgtgcagaacaagatgcagctagaa
gaagagcgcaggcttgcgtatgtggcgttcacgcgtgccgaaaacgtgctttgcctgagc
gacgccgaagatggcgtggcgggcgagagcgggtcacgctatccgtcgagatttttgctc
gaaatgaacatggacgagcttgatgtggcgcgcggattctcggacgatttgcttttggcg
gcacgggcttttattgctgaatcggaccgaaatcgtgacttgatgaacgattttgatgaa
gacgagagtcttggcgcagtaaagaaagcgcctacggcagaatttgcggtaggcgatcgt
gtggtacacaagatttttggaatcgggaccgttagcggtgtcgataaaaagaacttctgt
tacgaaattacttttgacaagtttgcgaccccgcgctcgattcagttcgatttcccgcta
gtgcggggatag
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