Fibrobacter succinogenes: Fisuc_0413
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Entry
Fisuc_0413 CDS
T01099
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Fisuc_0413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsu03400
]
Fisuc_0413
Enzymes [BR:
fsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Fisuc_0413
DNA repair and recombination proteins [BR:
fsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Fisuc_0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
PriA_C
PriA_3primeBD
Zn_ribbon_PriA
AAA_16
TrwB_AAD_bind
AAA_19
Viral_helicase1
AAA_30
AAA_22
Flavi_DEAD
AAA_33
DUF87
nSTAND_NTPase5
Zn_ribbon_6
Trm112p
VEGFR1-3_N_Ig-like
nSTAND6
PGM_PMM_II
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ACX74025
UniProt:
A0ABM5LEV0
LinkDB
All DBs
Position
complement(475255..477273)
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AA seq
672 aa
AA seq
DB search
MVKERCNSALLSRFCEVYIPLSPSVFTYGVPEGADIQRGSVVWVQLARRKPTLALVSRVH
SEKPSFDVRYACPHESGYVFSERYMESLEWVSKYYISSPMRTLNVFWPADFDKFLDALLA
EKSEPRGEAPSNGPEMEVCSDLPPLTGEQETALASLVEDLDKDGFRGTLLHGVTGSGKTR
VYQELVREALKRNKRVLILVPEIGLTPQTASRFEDYLKVPVVVLHSALSAPQKRAGYLAV
LDGSAKVVLGTRSAILSPFDFDVVILDEEHDSSFKQQDPAPRYHTRDLAFHLAQKYGALV
VLGSATPCLETFRNAKAGNLKLLTLKNRATAAPLPEVKVIDMGKVRQQKGVLMSPALREA
LSDCIAGGDQAIILMNRRGYSKIRVCTKCGETLYCKHCHIPLVYHKQYNALMCHYCAALY
PVDTPCPTCGAETYEFVGGAIEKLEEEIHEWVADAKVIRMDRDTTQNVGAVEKILTSFRN
REYNILLGTQMVAKGHDFPGVKLVGIVGADSGLGIPDFRSTERLYQLLSQTAGRAGRAGS
GGRVFIQTLNPTEPVMQYAIRHDFDGFAETESSNRQMAFYPPFCKLVEISCGSRDENLLR
DTVNRLESILRKESSMTVLGPVDAFVPKVQNVFWVKLYIKTQNLAAVRKVLAPILNAPKA
WVAGVEIKVELE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggaacgctgtaattcggcgcttctgtcgcgtttttgcgaggtttacatcccg
ttgtccccatcggtttttacttacggggtgccggaaggagcggatattcagcggggaagt
gttgtctgggttcaacttgcccgccgtaagcctacgcttgccttggtgagccgtgtccat
agcgagaaaccgtcgttcgatgtccggtatgcgtgcccgcatgagtcagggtatgtattc
tctgaacgttatatggaatcgctagagtgggtgtctaagtattatataagctcgcccatg
cgcactctgaacgtgttttggcccgctgattttgacaagttcctcgatgccttgctggct
gaaaaatctgaacctcggggcgaggctccctcgaatggacccgaaatggaggtttgttcg
gacctgccccccttgacaggcgaacaagagactgcacttgccagtcttgttgaagatttg
gataaggatggttttcgtggaacgctcctgcatggtgtgaccggcagtggcaaaacgaga
gtttatcaggaattggtgcgcgaagcgcttaagcgcaataagcgtgtgctcattctcgtg
ccagaaattgggcttactccgcagacggcatcgcgttttgaagattatttaaaagtacct
gttgtagtattgcattcggcactttcggctccgcaaaagcgtgcaggctatttggctgtg
ctcgatggttctgcgaaagtggtgcttgggacgcgcagtgccattctttcgccgtttgat
tttgatgttgttattttggacgaagagcatgattcttcgtttaagcagcaggacccggct
ccgcgttaccatacgcgtgacttggctttccacttggcgcaaaagtacggagctcttgtg
gtgcttggttctgcaacgccttgtcttgaaacgttccgcaatgcaaaggcggggaacctc
aaactgttgacgctcaagaaccgtgcgaccgcggctccgctccccgaagtgaaagtgatt
gatatgggcaaggtgcgccagcaaaaaggcgtgctcatgtctcctgcattgcgcgaagcg
ctttcggattgcattgcgggtggcgaccaggcgattatcctcatgaatcgtcgcggttac
tctaagattagagtttgtactaaatgtggtgaaacgctttactgcaaacattgccatatc
ccgctcgtgtaccataaacagtacaatgcgttgatgtgccattactgtgctgcgctttat
ccggtcgatacgccatgcccgacatgcggtgctgaaacgtatgaatttgtcggaggcgcc
attgaaaagctcgaagaagaaattcatgaatgggtggcggatgcgaaagtaatccgcatg
gatcgcgatacaacgcagaacgtgggcgctgtcgaaaaaatcttgacatcgttcaggaat
cgagaatacaatattttgcttggaacgcagatggtcgcgaaaggccacgatttcccaggc
gtgaagcttgtgggaattgtcggtgctgattcgggacttggcattcctgattttcgttca
acggaacgcttgtatcagctattgagccaaacggcgggacgtgcggggcgcgcaggtagc
ggtggccgcgtgtttatccagacgctcaacccgacagaacctgtgatgcagtatgccatt
cgccatgactttgatggctttgccgaaactgaatcttcgaatcgtcagatggctttttat
ccgccgttttgcaagcttgttgaaatcagttgtggctcgcgcgatgagaacttgcttcgc
gacacggtgaaccgccttgaaagtattttgcgcaaggaatcttcgatgacagtccttgga
cctgttgatgcgtttgtaccgaaagtgcagaacgtgttttgggtaaagctctacattaaa
acgcaaaaccttgcggctgtgcgtaaggtgcttgctccgattctgaatgcgcccaaggct
tgggtggcaggcgtggaaattaaagtagagctagaataa
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