Fibrobacter succinogenes: Fisuc_0453
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Entry
Fisuc_0453 CDS
T01099
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fsu
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsu03016
]
Fisuc_0453
Enzymes [BR:
fsu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Fisuc_0453
Transfer RNA biogenesis [BR:
fsu03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Fisuc_0453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ACX74065
UniProt:
C9RLB8
LinkDB
All DBs
Position
524680..526002
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AA seq
440 aa
AA seq
DB search
MKKYHLATYGCQMNEYDSAMIAQELDMCGCVETNNQEDADIIIVNTCSVREKAEETAIVN
ISKLKYLRKKNPDVKVVVCGCMAKNRGPELLKRLKNVNYIVGPDQYRKIPELLFGDAQSP
LHKTHHKMFIDEDRDENYLGEYAKLQNDVSAFVAIQRGCNKRCSYCIVPYLRGPEKYRDM
DDVLTEVKRAADKGITEVMLLGQTVNAYKTPNADFTTLLTKVSEIGGIKRIRFTSPHPRH
YTNELIDVLLNNPKVCHYAHIPLQSGSDAILKKMRRQHNMEQYMTVIEQLRSKDPYYAIS
TDVICGFVGETDEDFEQTIKAFEACQFDTAYMFIYSPRKGTESFNEAEILTPEEKSARHS
RLVELQNAITLKRNQMMIGRTEEILVEHGSTRDKTELVGKTDNFKKVIFKPEEGRIIKPG
DYVKVKIDDIRGWTLRGTLV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaataccacttggccacatacggctgccagatgaacgaatacgactccgcgatg
attgcgcaggagctggacatgtgcggttgcgtcgagacgaacaaccaggaagacgccgac
atcatcatcgtaaacacctgcagcgtgcgtgaaaaggccgaggaaacagccatcgtcaac
atcagcaaactcaagtacttgcgcaagaagaatcccgacgtgaaagtcgtcgtgtgcggt
tgcatggcaaagaatcgtgggccggaactgctcaagcgcctcaagaacgtgaactacatc
gtaggcccagaccagtaccgcaaaattccagaactcctgttcggggatgcccagagcccg
ctgcacaagacgcaccacaagatgttcatcgacgaagaccgcgacgagaactacctcggc
gaatacgccaagctccagaatgacgtgagcgcattcgtcgcgatccagcgcggttgcaac
aagcgctgcagctactgcatcgtgccgtacctccgcggccccgagaaataccgcgacatg
gacgacgtgctgacagaagtcaagcgcgccgccgacaagggcatcaccgaagtgatgttg
ctcggccagacggtgaacgcctacaagacgccaaacgctgacttcacgactttactaaca
aaagtttccgaaatcggtggtatcaagcgcatccgctttacaagcccgcacccgcgccat
tatacgaacgaactcattgacgttctcttgaacaacccgaaggtctgccattacgcgcac
attccgctccagagcggctccgacgccatcctcaagaagatgcgccgccagcacaacatg
gaacagtacatgaccgtcatcgagcagttgcgcagcaaggatccgtactacgccatttcg
actgacgtgatttgcggatttgtcggcgaaactgacgaagattttgaacagacgatcaag
gcatttgaagcctgccagttcgacacggcatacatgttcatttacagcccgcgcaagggc
acagaatcgttcaacgaagccgaaatcctcacgcccgaagaaaagtcggcacgccattcg
cgcctcgtggaactccagaacgccatcacgctcaaacgcaaccagatgatgattggccgc
accgaagaaatcctcgtcgaacacggctccacccgcgacaagacagaactcgtcggcaag
acggacaacttcaagaaggtcattttcaagcccgaagaaggtcgcatcatcaagccgggc
gattacgtcaaggtgaaaatcgacgatatccgaggctggacgctccgcggcacgctcgtg
taa
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