Fibrobacter succinogenes: Fisuc_0490
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Entry
Fisuc_0490 CDS
T01099
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fsu
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsu03016
]
Fisuc_0490
Enzymes [BR:
fsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Fisuc_0490
Transfer RNA biogenesis [BR:
fsu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Fisuc_0490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACX74102
UniProt:
C9RLF5
LinkDB
All DBs
Position
564588..565748
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AA seq
386 aa
AA seq
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MIKDEKYILVDSEESLANLLADLELYDMAAVDTEADSMYHYTARLCLIQITIGEHHYIVD
PLCGLDLAPLFKARAMQTLIFHGADYDLRLLWQTYGFSPKSIFDTMLAAKILGEQHLGLA
DLVKEYFGDELKKENQRADWTIRPLSLDMCEYAIHDTFYLHELCAILAEKLQQAGRMNWL
TEQCNTLIEHARTPNAPKKDPWRITGSSIYSPCALNILKHLWEWREKQAEELDRPPYKVM
QSELMLAIVNAQNSHFPEVSETFLPKLPRNFKGDRLDSFLNMLRTAVAVPECDWPMRLPK
APPPPVIPHSDLLNALKTWRDEKAEELKIDAALLANKSQLIWLAAPGNIPWEKRYEEAHL
MHWQQGLWNEILRDKLPTAKRIGDEE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagacgagaaatacatattggtagatagtgaagaatcgctcgcaaacttgctt
gctgatttggagctttatgacatggccgctgtcgacaccgaagcggattccatgtaccac
tacacggctcgtctctgtcttatccagattaccattggcgaacaccattatattgtggac
ccgctttgtgggctggaccttgcaccgctgttcaaggcacgtgcaatgcagacgctgatt
ttccacggtgcagattacgacctcagacttttgtggcagacttacggcttttcgccgaag
agcattttcgacacgatgcttgccgcaaagattctgggcgaacagcacctcgggcttgcc
gatttggtcaaggaatattttggcgacgagctcaagaaagaaaaccagagagccgactgg
acgattcgaccactttcgctggacatgtgcgaatacgccatccacgatacgttctacctt
cacgaactttgtgccattttagcagaaaagctgcaacaggccggtcgcatgaactggctc
acggagcagtgcaacacgcttatcgaacacgcaaggaccccgaacgccccgaaaaaagat
ccgtggcgcattacgggttccagcatttacagcccctgcgcattgaacatcctcaaacac
ttatgggaatggcgtgaaaagcaggccgaagaactcgaccgtccaccttataaggtgatg
cagtccgaactgatgcttgcgattgtgaatgcccagaattcgcatttcccggaagtcagc
gaaacgttcctgccaaagctcccccgcaatttcaagggcgaccgtctagattcgtttttg
aacatgttgcgcacagctgtggctgttccggaatgcgattggccgatgcgccttccgaag
gctccaccaccgccagtcatcccgcattcggatttgctcaacgcgcttaaaacgtggcgt
gacgaaaaggccgaagaactgaaaatcgatgcagcgctcctcgcaaacaagtctcagctg
atttggcttgccgctccgggaaacattccgtgggaaaaacgctacgaagaagcgcacttg
atgcactggcagcaaggcctctggaacgagattttgcgtgacaagttgccgacggcaaag
cgcattggcgacgaagaatag
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