Fibrobacter succinogenes: Fisuc_1181
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Entry
Fisuc_1181 CDS
T01099
Name
(GenBank) Exodeoxyribonuclease V RecC subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Fisuc_1181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsu03400
]
Fisuc_1181
Enzymes [BR:
fsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Fisuc_1181
DNA repair and recombination proteins [BR:
fsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Fisuc_1181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF4349
Motif
Other DBs
NCBI-ProteinID:
ACX74784
UniProt:
A0ABM5LHJ7
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All DBs
Position
1457666..1461436
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AA seq
1256 aa
AA seq
DB search
MPKFDSYERYIVAMLYLKFALNLENLADKMIDAVSDAWTNPFEAPAVIFPDPKLEQWFRL
KWVQKKKSLIGFKSMMIDRFLMEILIGDDTHKQKLHAEMLRNVILAHLVKETDGVPNYMR
MDDEVKRYLVIDRTLDETHLFDFASKMASLFLEYETSRPKDFIRRADGSSAPGILEKWKQ
DHLDDFFGIANHDIAKREAWQRELYSAIFHEHQGKPSLLTEVFENEAKRKGIERTEYLTI
PYLYKACQDDKGNVTFHTEHIGNTPLFIFGLGGMGQFYRVILQKYAETHDVYAYIQNPCM
EFWEDTSTVHDQNANIHRNWKSRDGQWKDNGTSLDDVREKMSVDYSNAGESTDVDDISEY
SNEEAEAENTLLCNWGRSGRDNIKLWCQAVNYDFDFSMSGREDDNRTAQDLPQDTLLHKV
QYAIANRINTLPNFTASDCKARDFSLDITAAPTKIREIEALHTNISKLMQKGARVNDILV
VSPALDDYRTAIKTIFDQTPEKKKYAGENEKEGFLHIPFAIVDSPARSSLTENVLDNLFT
ILEQGTITRPTFFELLRNPVVQLTRHITDEDVSNWESWIEATNIYRDREQKKEDWMSGVR
RLLLAKMTKNPVEFSDGEFLPYADMATSDNSSLCKFVECIESLKKWMEFAGCKQNVKHEI
VCENRIENLDKLCDFINEWLSMASSPDGFASERIIVNDVTQSIEGLRNQMDAGLQSISWK
VVKQTLLNAAQSSAYSCGSLFVNGITFMNFIPNRIIPVKHLFFIGGDSMNFPGAKQQNTL
DLRKSCRPWPGDDSPIAKRRYAFLCQLMSTSESFHISYVNQDIRKDAELYPTSVVNDIRK
FLVNAVNSKTDVSNEKVSQSDAWPENKISLDETRSFEDLFTQKSLRNKRAFLNMMQDGYA
HANPETDAIESASNNITAKLPDRVSIYMLSSFLKDPFQFRISQMLADSDSEDPEKEMFEP
VQLDALKKSTLLKMTLAAELSNKSDELEKFKKESKLKGGTPDGIFGDKLSSEIEENKKII
MDNMGEALVKKIKESWCYQAKIEDIQFERSDSEKWTLSGSLDWSDSSDLGKITEMISITS
SNKKPTIDNFLTPYIRALAVIAQRSNKAEMAEQEQSIKISVFHSEKGKDPTTSTVKMTPK
KATETLQEIYTEAFGSETRKPYFKAVPAKLTDTNMDTIRTYKDKLINGPWEHFEKKKLFD
PTTDVGFEADDFTKQWEEAIKMMNALTLLSKEAFEKTKSKKESTTSKTSKTTKKKA
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatttgacagctacgaaagatatattgtagccatgctatatttaaaattcgcg
cttaatctcgaaaatctcgccgataaaatgatcgacgccgtgtccgatgcctggacaaac
ccgtttgaagcaccagctgtaatcttcccggacccgaaactggaacagtggttccgcctg
aaatgggtgcagaaaaagaaatcgctcatcgggttcaaatccatgatgatcgaccgtttc
ctcatggaaatcctcatcggcgacgacacgcataagcaaaaattgcacgccgaaatgctc
cgaaacgtaatcctcgcccacctcgtcaaggaaacggacggagtcccgaactatatgcgc
atggacgacgaagtcaagcgctacctagttattgacagaacactcgacgaaacgcacctt
tttgactttgcgagcaaaatggcatcgctgttcctggaatacgagacaagccgccccaag
gatttcatccgccgtgccgacggaagttccgcccccggtatccttgaaaaatggaagcaa
gatcaccttgacgacttttttggaatagcaaaccacgacatcgcaaagcgcgaagcctgg
cagcgcgaactttattccgccattttccacgaacaccaaggtaaaccttcattattgacg
gaggtctttgaaaacgaagcaaagcgcaaggggattgaacgcacggaatacttgacgatt
ccctacctatataaggcatgccaagatgataaaggcaatgtcacattccacacggaacac
attggcaacactccgctatttattttcggccttggcggtatgggccagttctatcgcgtg
attttgcagaaatacgccgaaacgcacgacgtttacgcttacatccaaaacccgtgcatg
gaattctgggaagacacatcgactgtacacgaccagaacgccaacatccacaggaactgg
aaatcgcgcgacgggcaatggaaagacaacggcacaagccttgacgacgttcgcgaaaag
atgtccgttgactattccaacgcaggcgaaagcacggacgttgacgacatttccgaatac
agcaacgaagaagcggaagccgaaaacacgctgctctgcaactggggccgttccggccgc
gacaacatcaagctttggtgccaagcggtcaattacgattttgatttcagcatgagcggc
cgtgaagacgacaaccgcaccgcccaagatcttccgcaagacacgcttttgcacaaggtg
cagtacgcgattgcaaaccgaatcaacacgctgccaaactttaccgcaagcgattgcaag
gcgcgcgactttagccttgacatcaccgcggcaccgaccaagattcgtgaaattgaagca
ttgcacacgaatatcagcaagctcatgcaaaagggcgcacgagtgaacgacattctcgtc
gtgtcgcccgccctggacgattaccgcaccgccatcaagacgattttcgaccagacacct
gaaaagaaaaaatatgccggagaaaacgaaaaagaaggcttcttgcacattccatttgcc
atcgttgactcccctgccagaagctcactgaccgaaaacgttctagacaacctgtttacg
attcttgaacagggaaccatcacacgcccgacgttctttgaattgctgcgcaaccccgtc
gtacagctgacacgccacattaccgatgaagatgtcagcaattgggaaagctggattgaa
gcgacaaacatctaccgcgaccgcgagcagaaaaaagaagactggatgagcggcgtacgc
cgacttctcctcgccaagatgacaaagaatcctgttgaattttctgacggtgaatttctg
ccatacgccgacatggcgacaagcgacaacagttccctttgcaagtttgtagaatgcatt
gaatcgctcaagaagtggatggaatttgcaggttgcaagcagaacgtaaaacacgaaatt
gtttgcgaaaatcgcatagaaaacctcgacaagctttgcgatttcatcaacgaatggcta
tcaatggcaagctctcctgacggatttgccagcgaaagaatcatcgtcaacgatgtcacg
cagagcatcgaaggtctccgcaaccagatggacgctgggctacaaagtatttcatggaag
gtagtcaagcagacgctcctcaacgctgcgcaatcatccgcctacagttgcggctcgctg
ttcgtcaatggcatcacgttcatgaacttcatcccgaaccgaatcatccctgtaaagcac
ctgttctttatcggtggcgactccatgaacttccctggagcaaagcagcagaatacgctt
gaccttcgcaagtcttgccgaccgtggccgggcgacgactcgcctatcgccaagcgccgc
tacgcgttcctctgccagctcatgagcacaagcgaaagtttccacatcagctacgtgaat
caggacatccgcaaagatgccgaactttatccgacctcggtcgtgaatgacatccgaaag
ttcctagtcaatgcagtcaacagcaaaactgatgtttccaacgaaaaagtcagccagtcc
gacgcctggcccgaaaacaaaatttcgctcgatgagacccgcagttttgaagacttgttc
acgcaaaaaagcctccgcaacaagcgtgcatttctcaacatgatgcaagacggatacgcc
catgcgaatccggaaacagatgccatagaatccgcaagtaataacattacggcaaagctc
cctgatcgcgtttcaatctacatgctgagctcattcctgaaggatccgttccagttccgt
atcagccagatgctcgccgactccgattcagaagacccagaaaaggaaatgttcgagccc
gtccagctggatgccttgaaaaagagtacactactcaaaatgacgctcgccgcagaactt
tcaaacaagtccgacgaacttgaaaagttcaaaaaggaatccaagttgaaaggcggaaca
cccgacggaatctttggtgacaagctctcttccgaaattgaagagaacaagaaaatcatt
atggacaacatgggcgaagcccttgtcaaaaaaatcaaggaatcctggtgctaccaagcc
aaaattgaggacatccagtttgaacgtagtgattcggaaaaatggaccctttcgggctcg
ctggactggagcgacagcagtgaccttggcaagattaccgagatgatttcaattacgtcg
tccaataaaaaaccgaccattgacaatttccttaccccttacatcagggctctcgcagtt
atcgcccaacgatcaaataaagccgaaatggcagaacaggaacaaagcatcaagatttct
gttttccacagtgaaaaggggaaagacccgacaacatccaccgtcaagatgactccaaaa
aaggccaccgagactttgcaggaaatctacacagaagcattcggcagcgaaacgagaaaa
ccttacttcaaggcggttcccgcaaaattaaccgacacaaacatggacacgatccgtaca
tacaaggacaaacttatcaacggaccttgggaacactttgaaaagaaaaagctatttgac
cccaccaccgatgtaggcttcgaagctgacgattttacaaaacagtgggaagaggcgata
aagatgatgaacgccctcacgcttttgtcaaaggaagcctttgaaaaaacaaaaagcaaa
aaagaaagcacaaccagcaagacaagcaagactacgaaaaagaaggcataa
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