Fibrobacter succinogenes: Fisuc_1182
Help
Entry
Fisuc_1182 CDS
T01099
Name
(GenBank) Exodeoxyribonuclease V
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Fisuc_1182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsu03400
]
Fisuc_1182
Enzymes [BR:
fsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Fisuc_1182
DNA repair and recombination proteins [BR:
fsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Fisuc_1182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
NAT10_TcmA_helicase
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACX74785
UniProt:
C9RQA8
LinkDB
All DBs
Position
1461439..1465239
Genome browser
AA seq
1266 aa
AA seq
DB search
MENFSLNKFDPSQSLFIEASAGTGKTYTIQLMVSKLIKLGTPLKKILIVTYTEKAAGELK
DRIRKKIDEVLINRKIDKSDDSEEPLSDAKIALFTKAYQDVDNAAIFTIHSFCQKALKEF
AYDAGRPFNMSMIDDKEVNDLIEKFIRDNWSEDEEFKALLVNAEKTSSLINKLKDLFTKA
INVYKGKNDNGEEIIKLESPSIEWGEDCISKEEAEALLEKDIVDFESLKKFKKFYSNVQI
LEKDENKDKIYYSEEISSGEKAISDLLNTIHTWDSSTKNPFTPTKIGKNITDVPNDEFGN
ALKYVHERISKLSKIKEALQEELDSYPLKKFLFDHIPELFDEWQKYKTDMKAQSFNDMIL
SVHQAVLDKSKGESPLKTRLRAQYTYAIIDEFQDTNQLQWDIFSAVFDKIFVVGDPKQSI
YSFQGADVNVYQKAIQKINNGMSLKTNFRSTKGIIDGCNDLFNDSFFKPYEGSPKLVDFE
SSLSPDKEGQVKALPQINGKEVAPIWISQQNIDEIDFAQATVQKIVEWCSFVGDKTVLQV
FDKKDCTKLRNVSFKDFAVLARTRSEMDEIEDAMRAAGVPFSRYKDSNLFSSRECTEWIA
LFKAIDAPDFSAWNRRLLSEALITDFFRISYQEIEYVESEAFDDPENPVRKKINSWHELV
QKRRYAEMLERIYSDTQIEERLTEISKLQNLAKLRQIGNYAVEYLYNHNCSIEDLVRHLE
ALASYNAGTDDEDGNLIEKSTDYDAVQIMTIHASKGLEFPIVISVAGFKQKIKTDSGPFL
YHDKDEIRLGFGSIAKKRRAQEELEEWKRLFYVDFTRASSILILPRYEKWYGKDNVKEEF
KFLESSINELIKADEKRDSDKKLTTVLPKLEKWEPKKLSDDVKTKILKPLNEKSGAGAVL
TSEEIAQNIAQQKINMASLQKKLAGASIMQHSYSTLSGKADSQIESDDGNRPDRDDEEKT
AAKTSTVKIRDIDTEAKNCTTAFNPKLNYQTNLNETAKKFPRGSHAGNALHRIFENTKFK
QFGEENSTFEQALANPKTINLIEEEFKRESLPIWNHREAWLDIATHYTWNTLNARLPEIA
GSTTTSETFALTDIPENDHMPEVQFNQDASEETDENQAISETSASDILRRFCKGFIDLLF
VRTVNSQKYYSILDWKSDMLENNVYTPEALKEKVDNDYSIQRVLYSYCLIQWLKQFYGKG
TTENLSEAEIFEKHFGGIYYAFIRGTEGGTPKGIYAQTWNSFGELEKAYQKVKDLMSKPS
IVKEEK
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcagtcttaacaaattcgacccatcccaaagcctcttcatcgaagcctcg
gctggcacgggcaagacatataccatccagttgatggtttccaagctcataaagcttggc
acaccgctcaaaaaaatcctgattgtcacgtacaccgaaaaagcggccggagaactcaaa
gaccgtattcgtaaaaaaatagacgaagtcctcataaaccgaaaaattgacaaaagcgat
gattccgaggagccgctcagcgacgcaaaaatcgcgctgttcacgaaagcctaccaggat
gtcgacaatgccgccattttcaccatccattccttctgccaaaaggcgctcaaggaattc
gcctacgatgcaggccgtccatttaacatgtccatgatagacgacaaggaagttaatgac
ctcattgaaaagttcattcgtgacaactggagtgaagacgaggaattcaaagcattgttg
gtcaatgcagaaaagacatcttctttaataaataagttaaaggacttattcaccaaagcc
atcaacgtctacaaaggcaagaatgacaatggagaagaaatcatcaagcttgaatcccca
agcatagaatggggcgaggactgcatcagcaaagaagaggcagaagcacttttagaaaaa
gatattgttgattttgaaagtctgaaaaaatttaaaaagttctatagcaacgtccaaatt
cttgaaaaggacgagaacaaggacaagatatactattccgaagaaatctcaagtggtgaa
aaagcgatttccgatttgctcaacaccattcatacttgggattcatccaccaaaaaccca
ttcactccaacaaaaatagggaaaaacattaccgatgttcccaatgatgaatttggaaac
gctttaaagtacgtccacgaaagaatttcaaaactgagcaagatcaaagaagcgctccag
gaagagctcgactcctacccgctgaagaaattcctttttgaccacatacccgaactattt
gacgaatggcaaaaatacaagaccgatatgaaagcacagtcgttcaacgacatgattctc
tcggtccatcaagccgtacttgataaaagcaagggggaatccccactcaagacaagactt
cgcgcgcaatacacctacgccattattgatgaattccaagacacgaaccagctgcaatgg
gatattttcagcgccgtctttgacaagatttttgtcgtgggcgacccgaaacagtccatt
tacagtttccagggcgccgatgtgaacgtctaccagaaggcgattcaaaaaatcaacaac
ggcatgtctttaaagacaaacttcagatcgacaaaaggcatcattgatggatgcaatgat
cttttcaacgacagctttttcaagccctacgaaggttcacccaagctcgttgattttgaa
agttcactctcaccagataaagaaggccaggtcaaggcgttgccacaaatcaacggcaaa
gaagtcgccccaatttggattagccaacaaaatatcgatgaaattgatttcgcccaggcc
accgtccaaaaaattgtagaatggtgttcctttgttggcgacaagaccgttttgcaggtc
tttgacaaaaaagactgcaccaagctcaggaacgtttccttcaaggattttgcagtactc
gcaagaactcgaagcgaaatggatgaaatcgaggacgccatgcgcgcagccggcgttcca
ttcagccgctacaaggacagcaatcttttcagcagccgagaatgcaccgaatggattgcg
ctattcaaagccattgacgcgcccgacttttcggcatggaacagacgcctcttgagcgaa
gccctcatcacggacttcttcagaatttcttatcaagaaattgaatatgtcgaaagcgaa
gcgtttgacgaccccgaaaatccagtccgtaaaaaaatcaattcctggcatgagctcgtc
caaaaacgccgctacgccgaaatgctcgaacgtatttacagcgatacgcaaatcgaagaa
cgactgacagaaatttccaaattgcagaacttggcaaaactccgccaaatcggcaactac
gcggttgaatatctctacaaccacaactgttctatcgaagatctcgtacgccacctagaa
gctcttgccagctacaacgcaggcaccgatgacgaagacggcaacctcattgaaaagagt
accgactatgatgccgtacaaatcatgacaattcacgcttcgaaaggtcttgaattcccg
attgtcatttccgttgctggtttcaagcaaaaaatcaaaaccgattccggtccattcctc
tatcatgacaaagacgaaatccggctcggtttcggaagcatcgccaagaaacgtcgcgct
caagaagaactcgaagaatggaaacgactcttctacgttgacttcacacgtgcatcgtcc
atcttgattctgccacgatacgaaaagtggtacggcaaagacaatgtcaaggaagaattc
aagttcctagaaagttccataaacgagctcatcaaagctgacgaaaaacgcgattccgat
aaaaagctgacgaccgtcttgcccaagcttgaaaaatgggaaccgaaaaaactcagtgat
gacgtcaagacaaaaattctcaagccgctcaacgaaaaatctggagcaggcgcggttttg
acgagcgaagaaatcgctcaaaacatagcccagcaaaaaatcaacatggcaagcttgcag
aaaaaactcgcaggtgcaagcatcatgcagcattcatacagtacgctttctggaaaggcg
gattcgcaaattgaatccgatgacggcaatagacccgaccgagacgatgaagaaaaaacg
gcagcaaaaacatccaccgtcaaaattcgtgacatcgacacggaagcaaaaaactgtacg
acagcattcaacccaaagctcaattaccagacgaacttgaacgaaactgcgaaaaaattc
ccgcgtggttcgcacgccggtaacgcgctccaccgcattttcgaaaacaccaagttcaag
cagttcggcgaagaaaactcaacttttgaacaggctctcgccaacccaaagacgatcaac
ctcatcgaagaagagttcaagcgcgaatcgctccccatctggaatcatcgcgaagcttgg
cttgacatcgccacgcactacacctggaacacgctaaacgcaaggttgccggaaatcgca
ggcagcacgacgacatcggagacattcgcacttaccgacattcccgaaaatgaccacatg
ccagaagtacagttcaaccaggacgcctccgaagagaccgacgaaaatcaagcaatctct
gaaactagcgcaagcgacatcctcaggcgtttctgcaagggcttcatagacttgctattc
gtccgcaccgtaaacagtcaaaagtactactccattctcgactggaaatcggacatgctc
gaaaacaacgtctacacgcccgaagcgctcaaagaaaaagtcgataacgactactccatc
cagcgcgtcctttacagctactgcctgattcaatggctcaagcagttctacggcaaaggc
accaccgagaatttgagcgaagctgaaatttttgaaaaacactttggcggcatctattac
gcgttcatccgcggcaccgaaggtggcacccccaagggcatttacgcacaaacttggaac
agcttcggcgaacttgaaaaggcctaccaaaaagttaaagatctcatgagcaagccctcc
atcgttaaggaggaaaaataa
DBGET
integrated database retrieval system
