Fibrobacter succinogenes: Fisuc_1270
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Entry
Fisuc_1270 CDS
T01099
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fisuc_1270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsu03021
]
Fisuc_1270
03400 DNA repair and recombination proteins [BR:
fsu03400
]
Fisuc_1270
Enzymes [BR:
fsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fisuc_1270
Transcription machinery [BR:
fsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fisuc_1270
DNA repair and recombination proteins [BR:
fsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fisuc_1270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
7TMR-HDED
DUF7567
Motif
Other DBs
NCBI-ProteinID:
ACX74870
UniProt:
C9RQN4
LinkDB
All DBs
Position
complement(1567814..1572250)
Genome browser
AA seq
1478 aa
AA seq
DB search
MAEEMTEQFGDISIHLASPDLIRYWSYGEVTKPETINYRSFKPEKDGLFCEKIFGPVKNW
ECNCGKFKRIRYKGVICDRCGVEVTHSKVRRERMGHIELAIPLTHTWFVRNQPCVIGALL
NLNTKDLDHIIYYEKYVVIDPGTTDLEPNSLIDEAQYQDLVAEGREFEAKMGASAIKQLL
DRVDLTKLSEELRLQATSKSKTKQDDAVKRLKVVEAFKKSQMESFRSYYKNPDPARDASK
AWLKGLAEAVAEFKVDYEAKHSDFVLADAYEEFRHKYPNEARLLANQPSWMILDVLPVIP
PDLRPLVPLEGGRFATSDLNELYRRVINRNNRLKKLIDIRAPNVILCNEKRMLQEAVDQL
FDSGRRTARAGSARPLKSLAELLKGKQGRFRMNLLGKRVDYSGRSVIVVGPELRMHQCGL
PKRMALELYKPFIIQRLEEEGIVYTLKSAKKYVDAERPEVWDILEQIIEDHPVMLNRAPT
LHRLGIQAFYPKLIEGNAIRLHPLVCTAFNADFDGDQMACHLPLSFETQLECRVLMLSSN
NILHPASGQPIAVPGQDIVLGLYYLTKPRPNRKGEGMHFYDPAEAVRAYENDVVDLNANV
YLKLPAGRKIYMGALEKDCTCIREMADDNGNLEVQVKAGEKIKFLTLKEDNVIKTTVGRI
IFNEFVPNALGYANETFGKKVIAKSIDDLYRRTGNRVTVDYLDDLKANGYKWATRAGSSV
AIAEMVIPKEKQEMLDKAAEQVSKIRALYEDGVITDGERYNQTIDVWSKTTSDVAAKQWD
LLSHDRDGFNPVYMMADSGARGSREQIKQLSGMRGLMQKPIKQLGGQEVIENPIKSCFRE
GLNVMEYFISSHGARKGLADTALKTADAGYLTRRLVDVGQDLVITEPDCGTTNGIEVSAF
KDGDDTVIPLEERLLGRAPVDDIKHPVTGEVIVKAGELVTERDLPKISATGLEHIKMRSV
LTCDSKTGVCAKCYGRMLASGRPVDLGEAVGVLAAQSIGEPGTQLTLRTFHIGGASSRLT
VESDKKATVDGHIELEQVETVDHEGQKVVVSRMGELVIFDTTGINKGRYQIPYGAILHVE
NNATVKKGESMFEWDPYNSPIITNVSGTIAFSNLIENRTYRIERDEMTDVETWIVISDKQ
HGKNQLRPVIVINDDRGEKVGHFMLPDGAILAVHQGDRVTSGQVIAKLPRAAGKTRDITG
GLPRVAELFEARVPKNKAFIAPVDGLVKYGNEVRNNQEVIIQQMDGNEVKVLVPRGIHLA
VNDGDRVRAGQKISEGSVDPHDILDVLGPEDVQRHLVNEIQAVYRLQGVAIADKHIECIV
RQMMRKVRITDPGESEFLPGEEISKIRLRTENERLRALGKDEAKYQPMLLGITKASLATD
SFISAASFQETQKILTRASIEGCVDPLMGLKENVIMGRLIPCGTGARHLRNVQVIDADAD
EMEERRVQSAPAENYETGTGIQMQDNEIGASDEEDSDN
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaatgactgaacagtttggcgacatttctattcatctcgcctctccggac
ctgatccgttactggtcctatggcgaagtgacaaagccggaaacgattaactaccgttcc
ttcaagcctgaaaaggatggtcttttctgcgaaaagatctttggaccggttaagaactgg
gaatgcaactgcggtaagttcaagcgcatccgctacaagggcgtcatctgtgaccgttgc
ggcgttgaagtgactcactccaaggtccgtcgcgaacgcatgggccacatcgaacttgct
atccctctgacccacacctggttcgtccgtaaccagccgtgcgtcatcggtgcactcctc
aatctcaatactaaggacctcgaccatatcatctactacgaaaagtacgtggtgattgat
ccgggtacgaccgacctcgaaccgaactccctgatcgacgaagctcagtatcaggacctc
gttgccgaaggccgtgaatttgaagccaagatgggcgcatctgctatcaagcagttgctc
gaccgcgtcgacttgaccaagctctccgaagaactccgcttgcaggctacttccaagtcc
aagaccaagcaggacgacgctgtgaagcgcctcaaggtcgtcgaagccttcaagaagtcc
cagatggaaagcttccgcagctactacaagaatccggatccggcccgcgacgcaagcaag
gcctggctcaagggtcttgccgaagctgttgccgaattcaaggtagactacgaagccaag
cactccgactttgtgcttgccgacgcctacgaagaattccgccacaagtatccgaacgaa
gctcgcttgctcgctaaccagccgtcctggatgatccttgacgtccttccggttatcccg
cctgatcttcgtccgctcgtaccgctcgaaggtggccgctttgctacctccgacttgaac
gaactctatcgccgtgtcatcaaccgcaacaaccgcttgaaaaagttgattgacatccgt
gcccctaacgtgattctctgcaacgaaaagcgtatgctccaggaagctgtcgaccagctg
ttcgatagcggccgccgcaccgctcgtgcaggttctgcacgtccgctcaagagcctcgct
gaactcctcaagggtaagcagggccgcttccgtatgaacttgctcggtaagcgtgttgac
tattccggccgttccgtgattgtcgtgggaccggaacttcgcatgcaccagtgcggtctc
ccgaagcgcatggctcttgaactttacaagccgttcatcatccagcgcttggaagaagaa
ggcattgtctacacgctcaagtctgctaagaagtacgttgacgcagaacgtcctgaagtc
tgggacattctcgaacagattattgaagaccacccggtcatgttgaaccgcgctccgacg
cttcaccgcttgggtatccaggccttctatccgaagctcatcgaaggtaacgcgattcgc
ctccatccgctcgtctgtacagcattcaacgctgacttcgacggtgaccagatggcttgc
catcttccgcttagcttcgaaactcagctcgaatgccgcgtgttgatgctttcttcgaac
aacattcttcacccggcttcaggtcagccgatcgctgtgccgggccaggacatcgtgcta
gggctctactacctcaccaagccgcgtccgaaccgcaagggtgaaggcatgcacttctac
gacccggccgaagccgttcgcgcttacgaaaacgacgtcgtggatttgaacgccaatgtt
tacttgaagctcccggcaggtcgcaagatctatatgggcgctctcgaaaaggattgcacc
tgcatccgcgaaatggctgatgacaatggcaatcttgaagtccaggtcaaagctggcgaa
aagattaagttccttacccttaaggaagacaacgtcatcaagacgactgtcggccgtatc
atcttcaacgaatttgtcccgaacgctcttggctacgccaatgaaaccttcggcaagaag
gtgattgcaaagtccattgacgacctctatcgtcgtaccggtaaccgcgtgaccgttgac
tacctcgacgacctcaaggctaacggttataagtgggcaacgcgcgctggttcctctgtg
gcaatcgctgaaatggtgatcccgaaggaaaagcaggaaatgctcgacaaggctgccgaa
caggtttccaagattcgcgccctttatgaagacggtgtcattactgacggtgaacgttat
aaccagacgattgacgtgtggtccaagacgacgtccgatgtcgctgccaagcagtgggac
ttgctctctcacgaccgtgacggtttcaacccggtctacatgatggctgactccggcgct
cgtggtagccgtgaacagattaagcagctgtccggtatgcgtggtttgatgcagaagccg
atcaagcagctcggtggtcaggaagttattgaaaacccgattaagtcctgcttccgtgaa
ggcttgaacgtgatggaatacttcatttcgtctcacggtgctcgtaagggtcttgctgat
accgctcttaagacggctgacgctggttaccttacccgtcgtctcgtggacgtgggccag
gacctcgtgattaccgaaccggactgcggtacgacgaacggtatcgaagtttccgcattc
aaggacggtgacgatactgtcattcctcttgaagaacgtctcctcggtcgcgctccggtc
gatgacatcaagcacccggtgacgggcgaagtgatcgtcaaggctggcgaactcgtcact
gaacgtgacctcccgaagatttccgctacgggtcttgaacacatcaagatgcgctccgtg
ctcacttgcgactccaagactggtgtctgcgccaagtgctacggccgtatgcttgcttcc
ggtcgtccggttgacctcggcgaagctgttggcgtgcttgctgcacagtccatcggtgaa
ccgggtacgcagcttaccctccgtacgttccatatcggtggtgcttcttcccgtttgacg
gttgaaagcgacaagaaggctacagtcgatggccacatcgaactcgaacaggtcgaaact
gtcgaccatgaaggccagaaggttgtcgtctcccgtatgggcgaactcgttattttcgat
acgaccggcattaacaagggtcgttaccagattccgtatggtgcaatcttgcacgtcgaa
aacaatgctaccgtcaagaagggcgaaagcatgttcgaatgggatccgtataacagcccg
attatcacgaacgtttccggtacgatcgcatttagcaatcttattgaaaacagaacttac
cgtattgaacgcgatgaaatgaccgacgtcgaaacgtggatcgtcattagcgacaagcag
cacggtaagaaccaattgcgtccggtcatcgtcatcaacgacgaccgtggcgaaaaggtt
ggccactttatgttgcctgacggcgctatcctcgccgtgcatcagggtgaccgcgttact
tccggtcaggttatcgcaaagcttccgcgtgcagctggtaagacccgcgatattaccggt
ggtcttccgcgcgtcgctgaactcttcgaagctcgcgttccgaagaacaaggcattcatc
gcaccggttgacggtctcgtcaagtacggtaacgaagtgcgcaacaaccaagaagttatt
attcagcagatggatggcaacgaagtgaaagtgctggttccgcgtggtatccatctggcg
gtcaatgacggtgaccgtgtccgtgctggtcagaagatcagcgaaggcagtgtggacccg
cacgatatcctcgacgttctcggacccgaggatgtgcagcgccacttggtgaacgaaatt
caggcggtttaccgcttgcaaggtgtggctattgcagataagcacatcgaatgtatcgtt
cgtcagatgatgcgcaaggtccgcattacagatccgggtgaatccgaattcttgccaggc
gaagaaatttccaagatccgtctccgtaccgaaaacgaacgtctgcgcgctctcggtaag
gacgaagctaagtatcaaccgatgctccttggtatcactaaggcttccttggcaacggac
agcttcatctctgcagcttccttccaggaaacccaaaaaatccttactcgcgcctccatc
gaaggctgcgtggatccgctcatgggtcttaaggaaaacgtgattatgggtcgacttatt
ccgtgcggtactggcgcccgtcacttgaggaacgtccaagtgattgatgccgatgccgat
gaaatggaagaacgtcgtgtgcagagtgctccggctgaaaattatgaaaccggtaccgga
atccagatgcaggataacgaaatcggtgcttctgacgaggaagattcagataattaa
DBGET
integrated database retrieval system
