Fibrobacter succinogenes: Fisuc_2170
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Entry
Fisuc_2170 CDS
T01099
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Fisuc_2170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsu03400
]
Fisuc_2170
Enzymes [BR:
fsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Fisuc_2170
DNA repair and recombination proteins [BR:
fsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Fisuc_2170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
nSTAND3
PIF1
UvrD_C
AAA_22
SLFN-g3_helicase
UvrD-helicase
ATPase_2
AAA_23
HHH_5
Helicase_RecD
DEAD
AAA_28
T2SSE
AAA_29
ORC-CDC6-like
DUF4291
AAA_14
TrwB_AAD_bind
AAA
PhoH
NTPase_1
AAA_16
AAA_18
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACX75756
LinkDB
All DBs
Position
complement(2680503..2682578)
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AA seq
691 aa
AA seq
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MRLNDIESKKVVVITGTFPALQPGETISVEGDWGSHPKYGKQFQATSFEYLATEDNDILE
YLASGQFPGVGQKIAERIVEAFGDATADILDNNPDKFREVKIKGFPARKVEAFLARWQEA
RHSRETMLFLYKHEIVGSVAKRLWNKFGQATIERITQNPYMLCEEVWGIGFLKADEIAQK
VGFPKDSPERFQAALLYTLQEASVSDGHVFLPKNVLLERTFRNLRLMQDDEGAINTLLDE
FEKASECGRITREGDDCYFPPLYNAEQRIADNIKLRLRYNELSTEGFEDALAQWEREHKF
SFDPIQKRAIQMALSRKISIITGGPGTGKTTILKGILYLARQMEECVSLTAPTGRAAKRM
GECCGEKARTIHRLLEVDPISGKFHRDGDNKLQCNLLIVDEFSMVDTWLAASLLEATPLN
ARIVLVGDADQLPSVGAGNVLNDLLRCPKIPSTRLQHIFRQAGGNDIADKASKINQGISP
SPIEGTNFHFLPYESADEAKDIIARLVTRGIKEKIDINTQEMQLLTPMRKGPLGIYELNN
FLQDLLNPGKERIKIASGNWSTGDRVMQIRNNYDKNVFNGDVGIIYKIGKDTKKITVFYD
DKTVDYEPDEADELILAYACTIHKSQGSEYPAVIVVLDSSHSIMLQRNLIYTAITRAKGH
VWILSAPGAFYQAVRNNRSTRRYTRLTEKLD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgaacgatattgaaagcaagaaagtcgttgtcatcacgggaacatttcccgct
ttgcaacctggcgaaacaatctctgtagaaggcgactggggttcgcatccgaaatacgga
aagcaattccaggcgacttcttttgaatacctcgccaccgaagacaacgatatccttgaa
tacttggcaagcggtcaatttccgggtgtggggcaaaagattgccgaacgcattgtggaa
gcttttggcgatgcaaccgccgacattctcgacaacaatccagacaagttccgcgaagta
aaaatcaaaggcttccccgcccgcaaggtggaagcttttttggcacgttggcaagaagca
cgtcacagccgcgaaacaatgctgttcttgtacaagcacgaaattgtcggcagtgtggca
aagcgcctttggaacaagttcgggcaagcgacaattgaacgcatcacacagaacccgtac
atgctctgcgaagaagtctggggcatcggattcttgaaggccgacgaaattgcgcaaaaa
gtcggattcccgaaagacagccccgagcgttttcaggccgcattgctttacacattgcaa
gaagcgtctgtgagcgatgggcacgtatttttgcccaagaacgtactcctggaacgcacg
ttccgcaacttgcgtttaatgcaggacgatgaaggcgccatcaacacgctcctcgacgaa
ttcgaaaaggcaagcgaatgcgggcgcatcacgcgcgaaggcgacgactgctattttccg
ccgctttacaatgccgagcagcgcatcgcagacaacatcaagctccgtttgcgatacaac
gagctttcaacggaaggcttcgaagacgccctggcgcagtgggaacgcgaacacaagttc
agctttgacccaatccaaaaacgcgctatccagatggcgctctcgcgaaagatatccatc
atcacaggtggaccaggtacaggcaagacgacaatccttaaagggattttgtacctcgcc
cgccaaatggaagaatgcgtaagcctcaccgccccaacggggcgcgccgccaagcgcatg
ggcgaatgctgtggcgagaaagcccgcacaatccaccgattgctcgaagtggacccgatt
tcgggcaagttccaccgcgatggcgacaacaagctccaatgcaatttgctcatcgtcgat
gaattcagtatggtcgatacgtggcttgccgcctcgctcctcgaagcgacgccactcaac
gcgcgaatcgttctcgtgggcgatgccgaccagctccccagcgtgggagctggcaatgtg
ctgaacgacttgttgcgttgccccaagattccgagcacccgccttcagcacattttccgc
caggccggcggaaacgacatcgccgacaaagcatctaaaatcaatcagggcattagcccc
tcgcccatcgaaggaacgaacttccactttttgccctacgagtcggccgatgaagctaaa
gacatcatcgcccgcctcgtcacgcgcggcatcaaggaaaaaatcgacatcaacacgcaa
gagatgcaactcctcacgccgatgcgcaaaggaccgctcggcatttacgaactgaacaac
ttcttgcaagacctcctgaaccccggcaaggaacgcattaaaattgccagcggcaactgg
agcacaggcgaccgcgtgatgcaaatccgcaacaactacgacaagaacgtgttcaacgga
gacgtcggcatcatctacaaaatcgggaaagacacgaaaaaaattaccgtcttttacgat
gacaagaccgtggattacgagcccgacgaagccgatgaacttatccttgcgtacgcctgc
accatccacaagagccagggtagcgaataccccgccgtcatcgtcgtgctagattcaagc
cacagcatcatgctgcagcggaacctcatctacaccgccatcacgcgtgcgaaaggtcat
gtgtggattttgtctgcaccgggagcgttctatcaagccgtgcgcaacaaccgcagcaca
agacgatacacacgcctcaccgagaagttggattag
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