Fibrobacter succinogenes: Fisuc_3117
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Entry
Fisuc_3117 CDS
T01099
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
fsu
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fsu03009
]
Fisuc_3117
Enzymes [BR:
fsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Fisuc_3117
Ribosome biogenesis [BR:
fsu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Fisuc_3117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Nop53
eIF3_subunit
Motif
Other DBs
NCBI-ProteinID:
ACX76697
UniProt:
C9RQF0
LinkDB
All DBs
Position
complement(3839021..3840295)
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AA seq
424 aa
AA seq
DB search
MNYIVEEKHNGERIDKFLVGVMENVSRTDVQKLIEAGEVKVGGGKVSKNFRVETGMAVVV
EKMIEKESSTLEPEDIPLNIVYEDDDIVVINKPRNLVVHPGNGVSKGTLAAALLYHFKEN
LSTVNGPLRPGIVHRLDKDTPGLMVVAKNDAAHRHLAHQLETRTLHRTYNALVWGCPRDL
EGTIDAPIGRNPKNRLKMAVVKGGKESRTHYVAKQFFAIATLLELQLESGRTHQIRVHSR
YTGHPVVGDPLYDGRDESLNRVPPLMKPVAEKVLEIAPAQLLQAVKIELIHPRTNKKLTF
KVPMEEPFANVLKLLKKECPASAPVYDEEEGFRDFDAQIRFDEDDEFDEYEEPLEISPDE
AAPVKERKTRAQRLAEKKATAAKRRAVAAERKLIKQMKAARRKGVAPEDFVEPGYEPTID
PELL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaattatatcgtagaagaaaagcataatggtgaacgtatcgacaagttccttgtcggc
gttatggaaaatgtctcccgcacagacgtgcagaagctgattgaagcgggcgaagtcaag
gtcggcggtggcaaagtctccaagaacttccgcgtagaaacggggatggcggttgtcgtt
gaaaagatgattgagaaggaatcttcgactcttgaacccgaggatattccgctgaacatc
gtttacgaagatgatgatatcgtggtcatcaacaagccgcgcaatttggtggtgcatccg
ggtaatggcgtgagcaagggaacgcttgccgcagcgctcttgtaccacttcaaggaaaat
ctttcgaccgtgaacggtccgctccgtccgggtattgtccaccgtctggacaaggatacg
ccggggcttatggtggtcgcgaaaaacgacgctgcacacaggcatttagcgcaccagctc
gaaacgcgcacgctccaccgcacgtacaatgcgcttgtatggggttgcccgcgtgacctc
gaaggaacgattgacgctccgattggccgcaatccgaagaaccgcctcaagatggcggtg
gtgaagggcggtaaggaaagccgtacgcattatgtggcgaagcagttctttgcgattgca
acgctcttggaattgcagttggaatctggccgtacgcaccagattcgtgtgcatagccgt
tacacgggccatccggtcgtgggcgatccgctctacgatggtcgtgacgaaagcttgaac
cgtgtgccgcctctgatgaagccggtggcggagaaggttcttgaaattgctccggcgcag
cttttgcaggccgtgaagattgaactcattcatccgcgcacgaacaagaagcttacgttc
aaggttccgatggaagagccgtttgcgaatgtgctcaagctcttgaagaaggaatgcccg
gcatcggcgcctgtatatgacgaagaagaaggcttccgcgatttcgatgcgcagattcgc
tttgacgaagatgatgaatttgacgaatacgaagaaccgctggaaatctcgccagatgaa
gccgctcctgtgaaggaacgcaagactcgtgcccagcgcctcgccgagaaaaaggcgact
gccgccaagcgccgtgccgttgctgccgaacgcaagctcatcaagcagatgaaggctgct
cgccgtaagggagttgccccggaagactttgtggaaccaggttacgaacccacaattgac
ccggaattgctttaa
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