Fibrobacter succinogenes: Fisuc_3119
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Entry
Fisuc_3119 CDS
T01099
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu00100
Steroid biosynthesis
fsu00909
Sesquiterpenoid and triterpenoid biosynthesis
fsu01100
Metabolic pathways
fsu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Fisuc_3119
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Fisuc_3119
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fsu01006
]
Fisuc_3119
Enzymes [BR:
fsu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Fisuc_3119
Prenyltransferases [BR:
fsu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Fisuc_3119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ACX76699
UniProt:
C9RQF2
LinkDB
All DBs
Position
complement(3840897..3841979)
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AA seq
360 aa
AA seq
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MIDKLDSLDVGEKVLEGKAAWKYAEDILQLVSRTFALNIQVLRGKLHRSILLAYLYLRIA
DTVEDDPDMKATEKDRVLALFADVFKTGELETEKIRTFVAALPESWHGSEDPNKDLCSKS
EVVVPLLKSLPKNYQKPVCDVVIEMCGGMAKFALRQEAALSAGWFTLANVGELDEYCYYV
AGIVGKLLTKLFSADTCFINAEREAELSKLDVSFGLALQVVNIVKDCVEDSGRRVCFIPE
EICKRHGFAHPSELFAAGADAQKCGAVLSELVEKAWHHLDDAIAYTKLIPNIKMRTRLFC
LWPLFMAAENLSLIGNGVSVFTSDKKVKITRDTVKRIVKETSMHFYSDKWIDEAYKKIKG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgattgataaattggattctttagatgtgggcgagaaggtgctcgaaggcaaggcggcg
tggaagtatgccgaagatatcctgcagttggtgtcgcgtacgtttgcgctgaacatccag
gttttgcgtggcaagttgcaccgcagtattttgcttgcgtacctttatttgcgcattgcc
gatacggtcgaagatgacccggacatgaaggcaaccgaaaaagaccgcgtgcttgcgctg
tttgctgatgtattcaagacgggtgaactcgagaccgagaaaatccgcacgtttgtggcg
gcgctcccggaatcttggcatggctccgaagacccgaacaaggatctttgctcaaagtct
gaagtcgtggtgccgcttttgaagtcgcttcctaagaactaccagaagccggtttgcgac
gtggtgattgaaatgtgcggtggcatggcgaagtttgcactccgtcaggaagccgcgctt
tcggcgggctggtttacgcttgcgaacgtgggtgaactcgatgaatactgctactatgtg
gcaggcattgtcggcaagctcttgaccaagctattctcggcggacacgtgctttatcaat
gctgaacgcgaggcggaactttcgaagctggacgtgagctttgggcttgccttgcaggtc
gtgaacatcgtgaaggactgcgtcgaggattctggacgccgcgtgtgctttatccctgaa
gagatttgcaagcgtcatggctttgcgcacccgagcgaactgtttgcagcaggggctgat
gcacaaaaatgcggtgcagtgctttcggaacttgtcgagaaggcttggcatcatctggac
gatgcgattgcctacacgaagctcatcccaaacatcaagatgcgcacaaggctcttctgc
ctctggccgctctttatggcggcggagaacttgagcttgatcgggaatggcgtgtcggtg
ttcacttcggacaagaaggtgaaaatcacgcgcgatacggtgaagcgaattgtcaaggaa
acgtcgatgcacttctattcggacaagtggattgatgaagcttataagaaaatcaaagga
taa
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