Candidatus Protofrankia datiscae: FsymDg_0010
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Entry
FsymDg_0010 CDS
T01530
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsy03032
]
FsymDg_0010
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_0010
Enzymes [BR:
fsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FsymDg_0010
DNA replication proteins [BR:
fsy03032
]
Prokaryotic type
DNA Topoisomerases
FsymDg_0010
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FsymDg_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AEH07603
UniProt:
F8B077
LinkDB
All DBs
Position
10018..11952
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AA seq
644 aa
AA seq
DB search
MAYDASSIKVLEGLDAVRKRPGMYIGSTGERGLHHLVYEVVDNAVDEALAGYCDTIGVTL
LADGGVRVSDNGRGIPVGEHPTEKRPAVEVVLTTLHAGGKFDGKSYAVSGGLHGVGVSVV
NALSTRLEVEIRREGFTWFQPYENTRPAAPLAKGAPTRKTGTTVTFWADDTIFETTDYKY
ETLSRRLQEMAFLNKGLTISLRDERPEEPLEVTYRYAGGLVDFVEHLNASKDPIHKTVIS
LDSKGTGIEAELAMQWNSGYNESVYTFANTINTHEGGTHEEGFRAALTSAVNAYAKDQNL
LKPPKSNGKNADERLAGDDIREGLTAIISVKLAQPQFEGQTKTKLGNSEAKRFIQEMCYS
ALKDWLEANRVEARAIVSKALDAQRARIAARAARDLTRRKGLLGGTGLPGKLADCQYTDP
ERCELYIVEGDSAGGSAKGGRDSKFQAILPLRGKILNVEKARIDRVLKNTEVQALIQALG
CGIHDDFDASKLRYHKIVLMADADVDGQHIRTLLLTLLFRFMRPLVEAGYVFLAQPPLYK
IKWGREDWQYAYSDRERDGLIEHGIEAGRKLPKDAIQRFKGLGEMNATELWDTTMDPDRR
ILLQVTLDDAAVADELFSVLMGEDVDARRSFIQRNAKDVRFLDI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
gtggcctacgatgcaagttcgatcaaggttcttgagggtctcgacgcggttcgcaagcgt
ccgggtatgtacatcggctccaccggtgagcgtggtcttcatcatctcgtctacgaggtt
gtggacaacgctgtggatgaagcgttggccggctactgcgacacgatcggtgtgaccctg
ctcgccgacggcggtgtccgggtctccgacaacggccgtggtatcccggtgggtgagcat
ccgacggagaagcgcccggcggtcgaggtcgtcctgaccacgctgcacgccggcgggaag
ttcgacggcaagtcgtacgcggtctccggcggtctgcacggggtcggcgtgagcgtggtg
aacgccctgtccacccggctcgaggtggagatccgccgggagggcttcacctggttccag
ccgtatgagaacacccgtccggccgcgccgctggccaagggtgcccccacgaggaagacc
ggtacgaccgtcaccttctgggccgacgacacgatcttcgagacgaccgactacaagtac
gagaccctctcccgccggctgcaggagatggccttcctgaacaaggggctgacgatcagc
ctgcgggacgagcgtcccgaggagcccctcgaggtcacctaccgttacgccggcgggctc
gtcgacttcgtcgagcacctcaacgccagcaaggatccgatccacaagaccgtcatctcg
ctggactccaagggcaccggcatcgaggccgagctcgcgatgcagtggaactccggttac
aacgagtcggtctacacgttcgccaacaccatcaacacccacgagggcggcacccacgag
gagggcttccgcgcggcgctgaccagcgcggtcaacgcctacgccaaggaccagaacctg
ctcaagcccccgaagtccaacggcaagaacgccgacgagcgcctcgccggcgacgacatc
cgcgagggcctgaccgcgatcatctcggtgaagctggcgcagccgcagttcgagggccag
accaagacgaagctcggcaacagcgaggccaagcggttcatccaggagatgtgctattcg
gcgctgaaggactggctcgaggccaaccgggtcgaggcccgggcgatcgtcagcaaggcg
ctggacgcccagcgggcgcggatcgcagcccgcgccgctcgcgacctgaccaggcgcaag
ggcctgctcgggggcaccggcctgcccggcaagctcgccgactgccagtacaccgacccg
gagcgctgcgagctctacatcgtcgagggtgactcggccggcggctccgccaagggcggc
cgggactcgaagttccaggcgatcctcccgctgcgcgggaagatcctcaacgtggagaag
gcccgtatcgatcgggtgctgaagaacaccgaggtccaggcgctgatccaggcgctcggc
tgcggtatccacgacgacttcgacgccagcaagctccgctatcacaagatcgtcctgatg
gcggacgcggacgtcgacggccagcacatccgcacgctgctgctgacgctgctgttccgg
ttcatgcgcccgctggtcgaggccggctacgtcttcctcgcccagccgcccctttacaag
atcaaatgggggcgggaggactggcagtacgcctactccgaccgggagcgcgacggcctg
atcgaacacggcatcgaggccggccgcaaactgcccaaggacgccatccagcgcttcaag
ggcctcggcgagatgaacgccaccgagctgtgggacaccaccatggaccccgaccgccgc
atcctgctgcaggtgaccctggacgacgccgccgtggcggacgagctgttctccgtcctg
atgggtgaggacgtcgacgcccggcgctccttcatccagcgcaacgccaaggacgtccgt
ttccttgacatctga
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