Candidatus Protofrankia datiscae: FsymDg_0080
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Entry
FsymDg_0080 CDS
T01530
Name
(GenBank) peptidoglycan-binding LysM
Organism
fsy
Candidatus Protofrankia datiscae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
ImpE
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AEH07664
UniProt:
F8B132
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All DBs
Position
complement(118228..121218)
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AA seq
996 aa
AA seq
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MGIRAQALPRHHNAHPSVVLPVILTTGMMVALMRRRPRSKGGNPLGQIRTELRLAADVGA
ARFLDQALRLLAAELTAAGRTLPSVYAATVSDNELVLHLAPAEPDGPPPPWQTGRTPGTW
RIERTTSTVDGLLVDDSRRIPVDTPAPYPGLAVMGTDDRGARVLVDVEAAPGIISLGGDA
ALAREAAVSIAVELATNPWSNDLRVYMTGFSGRLVPIAPDRLRSSTSLGDVLDELESRRS
RRGRVAGGEPRNGGSLGPVLRGRPAARHQALWAPELLILAAPPSERETARLSALLRDPSQ
GVGVVTFGDSTAARWRFTVSPNRRLHLGVLGLEISAQTLSTREYPTIVRMLRKAGTAYAL
SGRERSTSRTAETETTGSGPDHPHPAYPSPQRISSPDAQSPRRPGPGPGNGTAQVEDRRR
GSEDAAVITAFPDESRPASTSNPAQEPTPWVPEIPLWMRPEASTVESESLPHNHPPIPPV
PSVPPPSAPPRTPPVWTPSPPPRTPPPAIAPPVGRPPKPPPPPSEPPLRLTTEHPDSINP
AGRVHSPSPSVDTSSRGGDSRGGDGASVWRNRAMPAWDLQVSGASGMAMEPVPPRAPGAR
SVQPYPFPPSTAFPAEASHLPSTPPPGELWPPPPPLAPAPAPRKTTGLLVQLSGRTAAGE
TLMGEASDDGGLPQTDPPGDRALSTLPAPLPQPVPQPVSQPPTALPVLLPATLASPLALP
VPVTPPAEPGELFRSTDVEIRIMGEITVEAPGPCDPDRREFLTELVVYLALHRSGVLSSA
LSAVLLPPETPDNVLSNELDHVAGWLGTNNEGLPHITVSDNGCWSLADGVRCDWDLFVAY
AHHSAQPESDSENDLTTALRLVTGPLWANLPAGRYRWLDSSRIRTITSTAVVDVAHRLAN
ITLSNGDTATAIAACRTGLRAAPTAEVLWRDLLRTVAARHDRKALEAVINEMYQMIAPQR
TDLGIQAETNTLVRELLPGFRRRQQSSSRRSAITGR
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
gtgggcatccgggcgcaggcactaccgagacaccacaacgcacacccatccgttgtccta
cccgtcatactgacgacaggaatgatggttgcactgatgaggcgacggccacgatccaag
ggcggcaaccccctcggtcagatcaggaccgagctccgtctcgccgcggacgtgggggcg
gcccggttccttgaccaggcactgcggcttctcgccgcggagctcaccgcggccggtcgc
accctgccatccgtgtatgcggcaaccgtctccgacaacgaactcgttctgcatctcgcg
ccggccgaacccgacggacctcctccaccatggcagaccggccggacaccgggtacctgg
cgtatcgagcggaccaccagcacggtcgacggcctgctcgtcgacgacagccggagaatt
ccggtggacacaccagccccctatccagggctggccgtcatgggcacggacgatcgggga
gctcgtgttctcgtcgacgtcgaggctgctcccggaatcatcagcctcggtggggacgct
gcgctcgcgcgggaagcggccgtgtccatcgcggtggaactggccacaaatccctggtca
aacgatctccgcgtatacatgactggattttccggacgtctcgtgccgatcgccccggac
cggctgcgatccagtaccagcctcggtgacgtcctggacgagttggaaagtcgtcggtcg
cggcgcggccgggtagctggcggtgaaccacgaaacggtggctccctcggcccggtgctc
cgggggcggccggccgctcggcatcaggccctgtgggcgccggagctgctaatcctggcc
gcccctccgtccgagcgggaaacagcacggctttccgctctcctcagggatcccagccag
ggagtcggtgttgtgaccttcggcgattcgaccgccgcacgctggcgcttcacggtgagc
ccgaaccgcaggctacatctcggcgtccttggtctggagatcagtgctcagacgctgagc
acgcgcgagtaccccaccattgtcaggatgctccgtaaggcgggcacagcatacgcactt
tccggccgggaacgctccacatcacgtaccgcagaaacggaaaccacaggttctggtcct
gaccatccacaccccgcatatccgtcgccgcaacggatctcctccccagacgcacagtcg
ccgcgccgtcccggccccggccccgggaacggcacagcacaggtggaggaccgtcgccgc
gggagcgaggacgccgctgtgatcaccgcgttcccggatgaatcacggccagcctccacc
tcgaatcccgcccaggagccgacgccgtgggtgcccgaaattccactgtggatgcgtcca
gaggcatccacagtggaatcagaatccctcccgcacaatcatccgccaattccaccggtg
ccgtcggtacctcccccgtcggcgccgccacggaccccaccggtgtggaccccgtcaccg
cccccgcggacgcctccgccggccatcgctcccccggttggccgaccgcccaaacccccg
ccgcctccgagcgaacccccgctacgactgacgacagagcatccggacagcatcaacccg
gcaggtcgtgtccacagcccttccccgtctgtggacacctcctcccgcggaggcgattcc
cgaggaggcgatggtgcctccgtctggcgcaacagagcgatgccagcctgggatctccag
gtatccggggcctccgggatggcgatggagcctgtgccgccacgtgctcctggtgcacgg
agcgtccagccgtatccgtttccaccgtcgaccgcgttcccggccgaggcctctcacctg
ccgtccacgccgccgccaggcgagctctggccgccaccgccaccgctggcaccggcaccg
gcaccgcggaagacgacagggctgctggttcagctttccgggcgaaccgcggcgggcgag
accctcatgggcgaggcttccgatgacggcggcctacctcagacggatccgcctggcgac
agggccctgtccacccttccggctccgctgccacaaccggttccgcaaccagtttcccaa
ccaccgacagcactacccgtgctactaccggcaactctggcatcgccgctggctctgccg
gtaccagtaacgccgccggccgagcctggagaattgttccgatcaaccgatgtcgaaatt
cggatcatgggagagatcactgtcgaggcacccggtccctgtgatccggatcgtcgggag
ttcctgaccgagctggtggtgtatctcgctctgcatcgctcgggagtgctttccagcgct
ctcagcgccgtgctcctgccgccagagactcctgacaatgtgctcagcaacgagctcgac
catgtagccggctggctcgggaccaacaacgagggcctcccgcatattacggtcagtgac
aacggatgctggagccttgctgacggcgtccggtgcgactgggatcttttcgtcgcatac
gcccaccactccgctcaaccggagtcggactccgaaaacgatctgacaacagcattacga
ctggtcaccggaccgctgtgggcaaacctgccggcaggccgctaccgatggctggactca
agcaggatcaggacgatcacctccaccgccgttgtcgatgtggcccatcggcttgctaac
ataacgctcagtaatggagataccgctaccgccatcgcggcgtgccgaacaggcctgcgt
gcagcgccaacagccgaggtcctgtggcgagatctactacgcacagtagctgcccgccat
gaccgcaaggccctggaagcagtgatcaacgagatgtaccagatgatcgcaccacaacgg
accgacctcggcatccaggcggaaacgaatacgctggtccgcgagctgctaccgggattc
cgtcggcgacaacagagcagcagtagaagatcagcgataacaggcagatag
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