Candidatus Protofrankia datiscae: FsymDg_0387
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Entry
FsymDg_0387 CDS
T01530
Name
(GenBank) ABC-type transporter, integral membrane subunit
KO
K02034
peptide/nickel transport system permease protein
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FsymDg_0387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fsy02000
]
FsymDg_0387
Transporters [BR:
fsy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FsymDg_0387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF6587
OppC_N
EhaL
Motif
Other DBs
NCBI-ProteinID:
AEH07948
UniProt:
F8B4K5
LinkDB
All DBs
Position
450115..451038
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AA seq
307 aa
AA seq
DB search
MSRSLAADPATRAGLEAQVEATAPTPGPRLGVDVRRLSRFFLRRPGLVLSLIVVALVALA
AFWPTLFTGRDPLLGVPADNFQPPSAHHWFGTDELGRDTYARVVHGAALSLKATLIAVAV
AFVVGGTLGLVAGFVGRWVEDVLMRFVDVLLSIPALFLSLALVTALGYGTVKVAVAVGIA
SVASFARVMRAEVLRVRQAVFVEAARSSGTRWYSVLGRHVLPNATGPVIVLATLDFGTAV
LAVSSLSFLGYGAAPPAPEWGTLVSDGRNYLANAWWLSTLPGLTVAATVLATNRIARALD
GEWANQR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgagccggtcactggccgccgacccggccacccgggccgggctcgaagcacaggtcgaa
gcaacagcgccgacgccgggcccgcggctgggcgtggacgtgcggcggctgtcgcggttc
ttcctgcgccgccccggcctggtgctgtcgctgatcgtggtggcgctggtggcgctggcc
gcgttctggccgacgttgttcaccgggcgtgacccgctgctgggggtgccggccgacaac
ttccagccgcccagcgcccaccactggttcggtaccgacgaactgggccgcgacacctac
gcccgggtcgtgcacggggcggcgctgtcactgaaggcgacgctgatcgctgtcgcggtc
gcgttcgtcgtcggtgggacactcgggctggtcgccggattcgtcggccgctgggtcgag
gacgtgctgatgcgcttcgtcgacgtgctgctgtccatcccggctctgttcctgtcgctg
gcgctggtgacggcgctgggatacggcacggtgaaggtcgccgtcgcggtggggatcgcc
agcgtggccagcttcgcccgggtcatgcgcgccgaggtgctcagggtgcgccaggccgtc
ttcgtcgaggccgcgcgttcgtcggggacacgctggtacagcgtgctcggacggcatgtg
ctgcccaacgcgacagggccggtcatcgtgctggcaacgctcgacttcgggaccgcggtg
ctggcggtgtcctcactgagcttcctcggttacggcgccgcgccgccggcgccggagtgg
ggcacgctcgtctccgacggccgcaactacctggccaacgcgtggtggctgtcgacgctg
cccggcctgaccgtggcggcgacggtactggcgaccaaccgcatcgcccgcgcactggac
ggagaatgggccaaccaacgatga
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