Candidatus Protofrankia datiscae: FsymDg_0527
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Entry
FsymDg_0527 CDS
T01530
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
fsy
Candidatus Protofrankia datiscae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
Laminin_II
GAF_3
OmpH
Baculo_PEP_C
MAP7
ATG14
Motif
Other DBs
NCBI-ProteinID:
AEH08069
UniProt:
F8B699
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Position
617985..621632
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AA seq
1215 aa
AA seq
DB search
MGEATKSERVKSEGATTGGRDEPALRQLLAGLTAVRGGDFRVRLPYGEDPLMNEIADVFN
GMTDQLSAIASEVAGAAREVGIEGRLGRHLRVPDAPGAWRELIESTNMAVGSLGGQVRDI
SQVAAAVARGDLSRKITVEAHGEVLELKNTINTMVDQLSSFAGEVTRVAREVGTEGRLGG
QAFPGVGGTWRDLTDSVNFMAGNLTVQVRSISQVAAAVARGDLSQKITVDARGEVLELKN
TINTMVDQLSSFAGEVTRVAREVGTEGRLGGQADVKGVSGTWKDLTESVNVMAANLTVQV
RSIAEVTTSVAKGDLTQKIRVDARGEVLELKETINTMVDRLSSFADEVIRVAGEVGTQGN
LGGQAVARGVSGTWRDLTDNVNSMASNLTSQVRNIAQVTTAVARGDLSKKIDVDARGEIL
ELKTTINTMVDQLSSFAAEVTRVAREVGTEGMLGGQAEVEGVSGTWKRLTENVNELAGNL
TRQVRAIAAVTSAVAAGDLTGSVSVEARGEVAELKDNINAMVRSLYETTRANQEQDWLKT
NLARISGLMQKHRDLNTVTELVMDELTPLVGTQYGTFFLAGSGAGTPAPALRLIASFGYQ
AHPDVPREFDLGQSLVGQVARTKKSIFIDRTPVHYVKISSSLGHAEPVNLIVLPVLFEDH
VLGVIELASFTPFTQVHRDFLDRLMEIIGVNINIIVANSRTDALLAESQRLAAELRARSE
ELQSRQDELQRSNAELAEKAALLARQNHDIEIKNFEIEQTRQEIEERARQLALSSRYKSE
FLANMSHELRTPLNSLLILARLLAQNPANNLSPKEVEYANVIHSAGSDLLQLINDILDLS
KVEAGKIDIHLERFALSALLDDVQGIFCPIIEEKGLRFTVEVAPDVPDALVSDQQRLLQV
LRNLLSNAVKFTQLGGVELRIRVVSDRVLDDERRPAVAFAVIDTGIGIAEENLDRLFGAF
QQGDGSTSRRFGGTGLGLSIAREVAALLGGVIRAQSEFGQGSTFTLYLPLSSPGAIGEQA
HGATRPAVSGPPTPAALPLPPGSSGSSGSSGLSGPQVSAAAPVSAPTPGDNGIPAHATTD
DVLRGRRILVIDDDVRNVFAITSILELYGLTVIHAPDGRMGIDILLATDGIELVLVDVMM
PEMDGYATMTAIREMPRFGALPIIAVTAKAMPGDRQKCLAAGADDYVTKPVDTDKLLACI
RQRLTRQKPDDRNTR
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgaggctacgaagtcggagcgggtgaagtcggagggggcaacgacgggagggcgg
gacgagcccgcgctgcgccagcttctcgccggtctgacggcggtgcgtggcggggacttc
cgcgtgcgtctgccctacggcgaggacccgctcatgaacgagatcgccgacgtgttcaac
ggcatgaccgaccagctttccgcgatcgcgtccgaggtggcgggagcggcccgggaggtc
ggcatagagggcaggctcggccgtcacctccgggtgccggacgcgcccggtgcctggcgg
gagctcatcgagtcgaccaacatggcggtggggagcctgggcggccaggtccgtgacatc
tcccaggtggccgcggcggtggcccgcggcgatctgtcacggaagatcaccgtggaggcg
cacggcgaggtcctggagctgaagaacaccatcaacacgatggtcgaccagttgtcgtcg
ttcgccggtgaggtcacccgggtggcccgggaggtcggcaccgaagggcggctgggcggg
caggcgttccccggagtgggcggaacgtggcgggatctcaccgactcggtgaacttcatg
gccggcaacctcaccgtccaggtccgttccatctcccaggtggccgcggcggtggcccgc
ggcgatctctcccagaagatcactgtggacgcccgcggggaggtcctggagctgaagaac
accatcaacacgatggtcgaccagttgtcgtcgttcgccggtgaggtcacccgggtggcc
cgggaggttggcaccgagggacgactgggcgggcaggccgacgtcaaaggtgtctcgggc
acctggaaggacctcaccgagtccgtcaacgtcatggcggccaacctcaccgtccaggtc
cgctccatcgccgaggtcaccacctcggtggccaagggcgacctgacgcagaagatccgg
gtggacgcgcgcggggaggtcctggagctcaaggagaccatcaacacgatggtcgaccgg
ttgtcctcgttcgccgacgaggtcatccgggtggcgggcgaggtggggacgcagggcaac
ctcggcgggcaggccgtcgcgcggggcgtctccggcacctggcgggacctcaccgacaac
gtcaactcgatggccagcaacctgaccagccaggtccgcaacatcgcccaggtcaccacc
gccgtggcccggggcgacctgtcgaagaagatcgacgtcgatgcccgcggggagatcctg
gagctcaagaccaccatcaacacgatggtcgaccagctgtcgtcctttgccgcggaggtc
acccgggtcgcccgcgaggtcggcaccgaggggatgctcggcgggcaggccgaggtcgag
ggcgtctcggggacgtggaagcggctgacagagaacgtcaacgaactcgccggcaacctc
acccgtcaggtgcgcgcgatcgccgcggtgaccagcgcggtcgcggccggtgacctcacc
gggtccgtctcggtggaggcacggggggaggtcgccgaactcaaggacaacatcaacgcg
atggtgcggtcgctgtacgagaccacgcgcgccaatcaggaacaggactggctgaagacc
aacctggcccgcatatccggcctgatgcagaaacaccgtgatctcaacaccgtcacggaa
ctggtcatggacgagctcacgccgctggtcggcacccagtacggcacgttcttcctggcc
ggatccggtgcgggcacacccgcgcccgcgctgcgcctgatcgccagcttcgggtaccag
gcccaccccgacgtgccgcgcgagttcgacctgggacagtccctggtcgggcaggtggcc
agaaccaagaagtcgattttcatcgaccggacaccggtgcactatgtgaagatctcatcc
agtctcggccacgccgaaccggtcaatctgatcgtgctgcccgtcctcttcgaggatcat
gtgctcggcgtcatcgagcttgcctccttcaccccgttcacgcaggtgcaccgggatttt
ctggaccggctgatggagatcatcggcgtcaacatcaacattattgtcgccaactcgcgt
accgacgcgctgctggcggagtcacaacgtctcgcagccgagctgcgggcgcgctccgaa
gaactccagagccgtcaggacgaactgcagcgttccaacgccgagctggcggagaaggcg
gctctgctggctcgccagaaccacgacatcgagatcaagaacttcgagatcgagcagacc
cggcaggaaatcgaggaacgggcccggcagctcgccctgtcgtccaggtacaagtcggag
ttcctcgccaacatgtcccatgagctgcgcacgccgttgaacagcctgctcatcctggcg
cggctgctggcgcagaacccggcgaacaacctcagcccgaaggaggtcgagtacgccaac
gtcatccactccgccggctccgatctcctgcagctcatcaacgacatcctcgatctgtcg
aaggtcgaggccggaaaaatcgacattcacctggagcgtttcgctctcagcgcgcttctc
gacgacgtccagggcatcttctgtccgatcatcgaggagaagggcctgcggttcaccgta
gaggtcgcccccgacgtgccggacgcgctggtcagtgatcagcagcgtctgttgcaggtg
ctgcgtaacctgctgtccaacgcggtcaagttcacccagctgggcggggtggaacttcgg
atacgggtggtcagtgaccgtgtactcgacgacgaacggcgcccggccgtcgcgttcgcg
gtgatcgacacgggtatcggtatcgccgaggagaatctggaccggcttttcggagccttt
cagcagggtgacggcagcaccagccgcaggttcggggggaccggcctgggactgtccatc
gcgcgcgaggtcgcggctctgctcggtggtgtgatccgtgcccagagcgagttcgggcag
ggcagcaccttcaccctctacctgccgttgtcctcgcccggggcgatcggtgaacaggcc
catggcgccacgcggccagccgtttccggcccgccgacacccgcggccctgccactgccg
cccggctcgtccggctcctctggctcctctggcttgtccggcccacaggtgtccgcggcc
gcgccggtatccgcgcccacacccggcgacaacggcatcccagcacatgccaccacggac
gacgtgctccgcggccgcaggattcttgtgatcgacgacgacgtccggaacgtgttcgcc
atcaccagcatcctcgagctctacggcctgaccgtgattcacgcccccgacgggcgcatg
ggcatcgacatcctgctcgccaccgacggcatcgagctcgttctcgtggacgtgatgatg
ccggaaatggacggttacgccacgatgacggcaatccgggaaatgccccgcttcggcgcg
ctgccgattattgccgtcaccgcgaaggccatgccgggcgaccggcagaagtgccttgcc
gccggcgctgacgactacgtgaccaagccggtcgacaccgacaagctcctcgcctgcatc
cggcagcggctcacccgccagaagccggacgacaggaatactcggtag
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