Candidatus Protofrankia datiscae: FsymDg_0598
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Entry
FsymDg_0598 CDS
T01530
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy03030
DNA replication
fsy03430
Mismatch repair
fsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FsymDg_0598
03430 Mismatch repair
FsymDg_0598
03440 Homologous recombination
FsymDg_0598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsy03032
]
FsymDg_0598
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_0598
Enzymes [BR:
fsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FsymDg_0598
DNA replication proteins [BR:
fsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FsymDg_0598
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FsymDg_0598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_16
AAA_19
AAA_30
Rad17
nSTAND3
Mg_chelatase
AAA_18
AAA_14
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AEH08128
UniProt:
F8AUT4
LinkDB
All DBs
Position
complement(688582..691404)
Genome browser
AA seq
940 aa
AA seq
DB search
MSGALYNRYRPATFAQVVGQEHVTGALMQALRTTRIHHAYLFSGPRGCGKTSSARILAAS
LNCVDGPTPQPCGVCDQCVSIRAGVSMDVTEIDAASHGLVDDARDLRERAFFAPASARFK
VFVVDEAHMVTAAAFNALLKVVEEPPPYLKFVFATTEPDKVIATIRSRTHHYAFRLVPPG
VLRDHLTSICAQEGVDVDPTVLPLVVRAGAGSVRDSLSVLDQLLAGAGPDGLGYERAVAL
LGLTDGVLLDEAVDALAAHDGASAFTVIDKVVSSGHDPRRFAMDLLERLRDLIVLAAVPD
APAKGLLETYSADQLERMRDQCTRMGQAELSHAAGVVHTGLVEMRGTTSPRLLLELTLAR
ALLPAASSDPSALLVRIERLERQGVAPGAATAPPAGATGVASTAPGTQPAVLPGPATAAG
AVAAAGPNVAAGAVPTGPAAAVGAVAAVGAVAAVAAPGVPTAAPAAAGPASRTAPANVAG
PGSGGTVPGAAAAPGTGAPIRAPQRPAATAAAPAPGPAGWAPAAEVPPPADVRPGSFAPV
PPAAPPDGPSGPGGPGGGTDVGRLRAVWGDVLRATRSRKATTHALLQEYASVADVRRDEV
VLAFSAPPIARMFGQGSNVDVLCAALTEVVGGTWRVTIAAGGGPSGGPPGGAGPSGDAGP
SGGFGGSGGWPGAANPGAGPPTGGPSVPPTAFGSSTAFSSSTAFGASTTSAPPATSVSPT
TSGAVGHHAAAPPTTPRGQAASADWPAVRPVGDPSASTAPDTVSGAVPQQAPRVWTAPQP
APNAVASPSPEKQHRRSASPTPMAVHDDTNEPHTPPAGLSPAGSPPPGISAAAGPATGPA
TAPVGPATPSATSATGPETDDAVDDEWFPADDPSGPAGASPESRSQHDVSSAPGMSSPAS
AKPAWGGQETSAAEPLSGEDAAMALLRTGLGATIIEQPAR
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggtgcgctgtacaaccgataccgtccggcgaccttcgcccaggtcgtcggccag
gagcatgtcaccggcgcgctcatgcaggcgctgcgcaccacccgcatccaccacgcctac
ctgttcagtgggccgcgcggctgtggcaagacgtcgtccgcgcgcatcctcgccgcctcc
ctgaactgcgtggacggcccgacgccgcaaccgtgcggggtctgtgaccagtgcgtgtcg
atccgcgctggggtcagcatggacgtcaccgagatcgacgccgcctctcacggcctcgtc
gacgatgcccgtgacctgcgggaacgcgcgttcttcgcgcccgcctcggcgcgtttcaag
gtgttcgtcgtggacgaggcgcacatggtcaccgcggcggccttcaacgccctgctcaag
gtcgtcgaggagcccccgccgtatctgaagttcgtgttcgcgaccaccgagccggacaag
gtcatcgccaccatccggtcccggacgcaccactacgcgttccggctggtcccgcccggc
gtgctgcgcgatcatctgacgtcgatctgcgcgcaggagggcgtggacgtcgacccgacc
gtgttaccgctggtcgtgcgggccggcgccgggtcggtccgggactcactgtccgtcctc
gaccaactgctcgcaggtgccggcccggacggtctgggctacgagcgggcggtcgcgctg
ctcggcctgaccgacggcgtcctgctggacgaggcggtcgacgccctggccgcgcatgac
ggcgccagcgccttcaccgtcatcgacaaggtcgtctcctccgggcacgacccacgccgc
ttcgccatggacctgctcgaacgcctgcgggatctgatcgtgctcgcggccgtcccggac
gcccccgccaaggggctgctggagacctactcggccgaccagctcgaacggatgcgtgac
cagtgcacgcggatgggccaggccgagctctcccacgccgccggcgtcgtgcacaccggc
ctggtcgagatgcgcggcacgaccagcccgcggctgctgctcgaactgacactggcgcgc
gcactgctgcccgccgcgagctccgatccgtcggcactgctggtccgcatcgaacggctg
gaacgtcagggggtggcacccggtgccgccaccgccccgcccgcgggcgccacgggcgtc
gcgagtacggcccccggcacgcaaccggccgtccttccaggtccggccaccgccgcgggc
gcggttgccgcggcaggcccaaacgtcgcggcgggtgcggttcccacgggcccggctgcc
gctgtgggcgcggttgccgctgtgggcgcggttgccgctgtggcggctccgggcgtcccg
acggcagctccggccgccgccggaccggcatccagaacagctccggccaacgtggcgggt
cctgggtctgggggaacggttcccggcgcggcggccgcgccgggaaccggcgcgccgatc
cgagccccgcagcggcctgccgcgactgccgcggcgccggctcccggtccggctggctgg
gctcccgcggccgaggtgccgccaccagccgacgtccgtcctggctctttcgctcccgtt
cctcccgcggctccgccggacgggccaagcgggccgggcgggccgggcggcggaaccgac
gtcggccggctgcgcgcggtctggggcgacgtgctgcgcgcaacccggtcacgcaaagcc
accacacatgccctgctgcaggagtacgcatcggtcgcggacgtccgccgcgacgaggtc
gtcctggccttctcagcgccaccgatcgcccggatgttcggccagggcagcaacgtggac
gtcctgtgcgccgcgctgaccgaggtcgtcggcggcacctggcgggtcaccatcgccgcg
ggcggcgggccgtcaggcgggccgcccggaggtgcggggccctctggcgacgccggcccg
tcgggcggcttcgggggatccggcggctggccgggcgccgcgaacccgggcgcggggccg
cccaccggcggcccctccgtcccgccaacggccttcggttcgtcgacagctttcagttcg
tcgacagccttcggcgcgtcgacgacgtctgctccaccggcgacgtctgtctcaccgacg
acgtccggtgctgtgggccatcacgccgccgcaccgccgacgacgccacgaggccaggcg
gcatccgccgactggccggccgtccggcccgtgggcgacccatcggcatccacggccccg
gacacggtctcaggggcggtcccgcagcaggcgccacgggtgtggacagctccgcaaccg
gctccgaacgccgtcgcatcgccatcgcccgaaaaacagcatcggcgcagcgcctcgccc
actcccatggctgttcacgacgacacgaacgagccacacacgccaccggcaggcctgtcg
ccagcgggttcgccaccgccggggatctcggcggcggcaggtccggcgacgggtcccgcg
acggccccggtgggtccggcaacgccatcggctacctcggcgaccggtccggagaccgac
gacgcggtcgacgacgaatggttccccgccgacgacccgtccgggcccgctggtgcctcg
ccggaaagccgaagccagcacgacgtgtcttccgcgcccgggatgtcgtcccccgcgtcg
gcgaagccggcctggggaggacaggaaacctcggccgccgaaccgctgtcgggcgaggac
gccgcaatggccctgctacgaaccggcctcggcgccacgatcatcgaacagcccgcaagg
tga
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