Candidatus Protofrankia datiscae: FsymDg_0718
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Entry
FsymDg_0718 CDS
T01530
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
fsy
Candidatus Protofrankia datiscae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
PilJ
Laminin_II
ATG17_like
Baculo_PEP_C
GAF_3
Prominin
DUF2732
RNase_Y_N
OmpH
Motif
Other DBs
NCBI-ProteinID:
AEH08240
UniProt:
F8AVE4
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All DBs
Position
838926..842978
Genome browser
AA seq
1350 aa
AA seq
DB search
MTMVSESAPVDDHFIDDLLGALTALCAGDFSARLGERSGRDALIAQRFDELAALQQRHSG
ELERVSKVIRRDGRLTERMADLGFEGGWSLSSQAVNSLIDDLARPTHEVARVIAAVAEGD
LSQHMALEIAGQPVRGEFLTIGTTVNTMVDQLSSFADEVTRVAREVGTEGNLGGQARVKG
VSGVWRDLTESVNSMAGNLTSQVRNIAQVTTAVAQGDLSQKITVDARGEIYELKSTVNTM
VDQLSAFADEVTRVAKEVGTEGRLGGQAQVKGVSGVWRDLTDSVNVMAGNLTTQVRSIAE
VAAGVARGDLTRQITVDARGEVAALAHTVNTMVEQLSSFAAEVTRVAWEVGTEGNLGGQA
HVRGVSGVWRDLTESVNSMAGNLTSQVRNIALVTTAVARGDLSQKITVPAQGEIAELKDT
VNTMVEQLSSFAAEVTRVAWEVGTEGNLGGQAHVRGVSGVWRDLTESVNSMAGNLTSQVR
NIALVTTAVARGDLSQKITVPAQGEIAELKDTVNTMVEQLSSFADEVTRVAKEVGTEGKL
GGQATVDGVAGTWKALTDNVNQLASTLTTQLRAIAEVSTAVTRGDLTRSITVEAEGEVAE
LKDNINQMIANLRETTEKNAQQDWLKSNIARIGSKMQGQRDLYAVCQMIISEMTPAVGAQ
LGTVYLLDFIEGDKLRHVAGYGSAPRKRSDGTFLFGEGLIGHAAVEKKGIRVEQVPNGYL
YIRSGLGEAPPSDLVVVPVLFEEQVLGVIELASFTRFSELHLHLVDQLVGTIGVVLNTIM
ANARTEELLAQSQRLTQELRSQSVELQRTNNELEEKAALLEEKNREIEMARIGLEEKAEQ
LALSSQYKTEFLANMSHELRTPLNSLLLLAKLLADNPEANLTPKQIDFAETIHSAGSELL
ELINDILDLSKVEAGKMDVEATTVRTTTLCDAVAQIFGPLAEERGLSFEVTVASDVPAEF
VTDEQRIQQVLKNLLSNAVKFTDSGEVRLDVTVASDEIAFTAPSLSAAPVALAFSVSDTG
IGVAADKLRMIFEAFQQADGTTSRRYGGTGLGLSISKELVRLLGGAIGVASAVGQGSTFT
LYVPSVMPSEVLPSTTPGDNEGTIMLSGEPRAAASRRPAGAQGRHPLEGSRLAGRPVGSA
GVPGEDADPEPAATTWSSQAGSGKDGPARNGSAAEGPGALSVPAARRSSRSVPGVTGLVT
TGMSFLTEAPEEFARPEPVNGLDETDPLVGATVLVVDDDVRNVFALTSALEMHGMRVLYA
DNGHDAIRLLQQEGSMIDLVLMDVMLPGLDGNETTSTIRQMPAFAALPIVVLTANAMPGD
REKSFEAGATDYITKPVDLRHLLSAMRSQL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggtgtcggaatccgcgcccgtggacgaccacttcatcgacgatttgctcggt
gcgctgacggcgttgtgcgcgggtgacttctccgcccgtctcggggagcggtccggccgc
gacgcgctgatcgcccagcgcttcgacgagctggcggccctgcagcagcggcactccggg
gagctggaacgggtcagcaaggtgatccggcgggacggccggctgaccgagcggatggca
gacctcggtttcgagggcggctggtcgctgtcgagccaggcggtcaactcgctcatcgac
gaccttgcgcgcccgacgcacgaggtcgcgcgtgtgatcgcggctgtcgcggagggtgat
ctctcgcagcacatggcgctggagatcgccgggcagccggtgcggggtgagttcctcacg
atcggtacgaccgtgaacaccatggtggaccagctctcctcgttcgcggacgaggttacc
cgggtggcgcgggaagtgggtaccgagggcaacctgggtggccaggcgcgggtcaagggc
gtctccggggtgtggcgggatctgaccgagtcggtgaactcgatggcgggcaacctcacc
agccaggtccgcaacatcgcccaggtcacgacggcggtggcgcagggcgatctgtcccag
aagatcactgtggacgcacgaggtgagatctacgagctcaagtcgaccgtgaacacgatg
gtcgaccagctctcggcgttcgccgacgaggttacccgggtggccaaggaggtcggtacc
gagggcaggctcggcgggcaggcccaggtcaagggcgtgtccggggtgtggcgggatctg
accgactcggtgaacgtcatggccggcaacctcaccacgcaggtgcgcagcatcgccgag
gtcgcggccggggtcgcccgcggcgacctcacccgccagatcaccgtggacgcccggggc
gaggtcgcggccctcgcccacaccgtgaacacgatggtggagcagttgtcgtcgtttgcg
gcggaggtgacgcgggttgcctgggaggtgggtaccgagggcaatctgggtggtcaggcg
cacgtgcggggtgtgtccggggtgtggcgggatctgaccgagtcggtgaactcgatggcg
ggcaacctgaccagccaggtgcgcaacatcgcgttggtgacgacggcggtggcccggggt
gacctgtcgcagaagatcacggtgccggcgcagggtgagatcgccgagctgaaggacacc
gtgaacacgatggtggagcagttgtcgtcgtttgcggcggaggtgacgcgggttgcctgg
gaggtgggtaccgagggcaatctgggtggtcaggcgcacgtgcggggtgtgtccggggtg
tggcgggatctgaccgagtcggtgaactcgatggcgggcaacctgaccagccaggtgcgc
aacatcgcgttggtgacgacggcggtggcccggggtgacctgtcgcagaagatcacggtg
ccggcgcagggtgagatcgccgagctgaaggacaccgtgaacacgatggtggagcagttg
tcgtcgtttgccgacgaggtcacccgggtggccaaggaggtcggtaccgagggcaagctc
ggcggccaggccacggtcgacggggtggccggcacctggaaggccctcaccgacaacgtc
aaccagctcgcgtccacgctgacgacccagctccgggcgatcgccgaggtgtcgaccgcg
gttacccgcggtgacctcacccgctcgatcacggtggaggccgagggtgaggtcgccgag
ctcaaggacaacatcaaccagatgatcgccaacctgcgggagaccaccgagaagaacgcc
cagcaggactggctgaagtcgaacatcgcccgtatcggcagcaagatgcagggccagcgc
gacctgtacgcggtctgccagatgattatcagtgagatgacgccggcggtcggcgcccag
ctcggcacggtctacctgctcgacttcatcgagggcgacaagctgcggcacgtcgccggc
tacggctcggcgccccgcaagcgctccgacggcaccttcctgttcggggagggcctcatc
ggccatgccgcggtggagaagaagggcatccgggtggaacaggtgcccaacggctacctc
tacatccgcagcggcctcggggaggctccaccgagcgatctcgtcgtcgtgccggtcctc
ttcgaggagcaggtgctcggggtcatcgaactcgcctccttcacccggttctccgagctg
cacctgcacctggtcgaccagctcgtcggcacgatcggtgtcgtcctgaacacgatcatg
gcgaacgcgcggacggaggagctgctcgcccagtcgcagcgcctcacccaggagttgcgc
tcgcagtcggtggagctccagcgcaccaacaacgagctggaggagaaggccgcgctgctg
gaggagaagaaccgggaaatcgaaatggcccgcatcgggctggaggagaaggccgagcag
ctcgccctgtcgtcgcagtacaagacggagttcctggcgaacatgagccacgagctgcgc
acgccgctcaacagcctgctgctgctggcgaagctgctcgccgacaacccggaggccaac
ctcacccccaagcagatcgatttcgccgagacgatccactcggccggttccgaactgctc
gagctcatcaacgacattctcgacctgtcgaaggtcgaggccggcaagatggacgtcgaa
gccaccaccgtccgcaccacgaccctgtgcgacgcggtcgcacagatattcggcccgctc
gccgaggagcgggggctgtcattcgaggtgacggttgccagcgacgtcccggcggaattc
gtcaccgatgagcagcgtattcagcaggtgttgaagaatctgctgtccaatgcggtgaag
tttactgattccggtgaggtgcgcctggacgtcaccgtcgcgtccgacgagatcgcgttc
accgcgccgagcctgtccgccgcgccggtggcgctggcgttcagcgtgtccgacaccggt
atcggggtggcggccgacaagctccgcatgattttcgaggccttccagcaggcggacggg
acgacgtcacgccgttacggcggtaccgggctcggcctgtcgatcagcaaggagctcgtg
cggctgctcggcggggccatcggggtcgccagcgccgtcggccagggcagcaccttcacc
ctgtacgtaccgtcggtgatgccctcggaggtcctgccctccaccacccccggggacaac
gagggaaccatcatgctgtccggggagccccgcgcggcggcgtcgcgccggccggcgggc
gcacagggcaggcatccgctggagggatcccggttggccggccggccggtcggttccgcc
ggggtgccgggcgaggatgccgaccccgagccggccgccacgacctggtcgagccaggcg
ggatcgggtaaggacggaccggccaggaacggatccgccgcggaggggccgggtgcgctg
tcggtgccggcggcacgccgttcgtcgcgttcggttccgggcgtgacagggctggtgacg
accggtatgtccttcctcaccgaagcgcccgaggagttcgcccgccccgagcccgtcaac
gggctggacgagaccgacccgctggtcggcgcgaccgtgcttgtcgtcgacgacgacgtc
cgcaacgtgttcgccctcaccagcgcgctggagatgcacggcatgcgggtgctgtacgcg
gacaacggccatgacgcgatccggctgctccagcaggagggctcgatgatcgatctggtg
ctgatggacgtgatgctgccgggtctggacgggaacgagaccacgtcgacgatccggcag
atgcctgccttcgccgccctgccgatcgtggtgctgaccgcgaacgcgatgccgggtgac
cgggagaagagcttcgaggcgggcgcgaccgactacatcaccaaaccggtcgacctcagg
catctgctcagcgccatgcggtcgcagctgtag
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