Candidatus Protofrankia datiscae: FsymDg_0846
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Entry
FsymDg_0846 CDS
T01530
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy00300
Lysine biosynthesis
fsy01100
Metabolic pathways
fsy01120
Microbial metabolism in diverse environments
fsy01230
Biosynthesis of amino acids
Module
fsy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FsymDg_0846
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fsy01002
]
FsymDg_0846
Enzymes [BR:
fsy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FsymDg_0846
Peptidases and inhibitors [BR:
fsy01002
]
Metallo peptidases
Family M20
FsymDg_0846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AEH08358
UniProt:
F8AWF7
LinkDB
All DBs
Position
992556..993689
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AA seq
377 aa
AA seq
DB search
MRLDLSLSATELTRAVVDIPSPSGAESTLADAVEEALTGLGGLRVDRDGDAVVARTELGR
QTRVLLAGHLDTVPIADNLPSRLADGHLYGCGTSDMKAGVAVMLRLAAVLAGSVGSVGTA
ASTPSVGFVPAHDVTWVFYDNEEVDAVRNGLRRLAANHRDWLDADLALLLEPTSGEIEAG
CQGTLRVAVTVPGRRAHSARSWLGENAIHRAAPLLERLASYQPRTVTIDGCVYREGLNAV
RITGGVAGNIVPDVCEVLVNYRFAPDRDVAQALDHVRETLDGFPVELTDSAAGALPGLTA
PAAAAFVRAVGRTPVAKYGWTDVARFAALGVPALNYGPGDPNLAHTRDEHVELELIDTAE
DVLRRYLTGPAAGPGRP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgatctgagcctgtcggcgacggagctgacccgcgctgtcgtcgacatcccc
tcgccgagcggggccgagagtacgctcgcggacgcggtcgaggaggccctgaccggcctc
ggcgggctgcgggtggaccgtgacggcgacgcggtcgtggcccggaccgagctgggccgg
cagacccgggtgctgctcgccgggcatctggacaccgttccgatcgcggacaacctgccc
agccggctggcggacgggcacctgtacggatgcggcacctcggacatgaaagccggggtg
gccgtgatgctgcggctggcggccgtcctcgcgggctccgtggggtctgtcggtaccgcc
gcgtccacgccgtccgtgggtttcgttcccgcgcacgacgtgacctgggtcttctacgac
aacgaagaggtcgacgccgtccgcaacggcctgcgccgcctggccgcgaaccatcgggac
tggctggacgccgaccttgcgctgctcctggagccgacgtcgggcgagatcgaggccggc
tgccagggcaccctgcgggtggccgtcacggtgccgggacgccgggcgcactcggcccgg
tcatggctcggggagaacgcgatccaccgggccgcgccgctgctggaacggctcgccagc
tatcagccgcggacggtgacgatcgacggctgtgtctaccgggagggtctcaacgccgtg
cggatcaccggcggcgtggccggcaacatcgttccggacgtgtgcgaggttctggtcaac
tacaggttcgctccggaccgtgacgttgcccaggcgctcgaccacgtccgggagaccctg
gacgggttcccggtggagctgaccgacagcgcggccggtgcgctgcccgggctgaccgcg
ccggccgcggccgcgttcgtccgggcggtggggcgcacgcccgtcgccaagtacggctgg
acggacgtggcccggttcgcggccctcggcgtcccggcgctcaactatggcccgggcgat
cccaatctggctcacacccgggacgaacacgtcgaactggagctgatcgacaccgctgag
gacgtgctacgccgctacctgaccgggccggccgccggtcccggccggccgtga
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