Candidatus Protofrankia datiscae: FsymDg_0980
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Entry
FsymDg_0980 CDS
T01530
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsy03021
]
FsymDg_0980
Transcription machinery [BR:
fsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FsymDg_0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_5
Sigma70_ECF
MarR_2
HTH_Crp_2
DUF7343
PF0610-like_N
MarR
GerE
HTH_3
HTH_28
NirdL-like_HTH
DUF8073_C
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEH08485
UniProt:
F8AXY6
LinkDB
All DBs
Position
complement(1143951..1144949)
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AA seq
332 aa
AA seq
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MATTRQRSKAFLDDSHDLFLAADEEATDETSPGTPVAEAALAPRSPRPATVAAQGHPKND
RSDSDADADAGHSGHDHPGETNDRVRARELFTQLVALPEGDQQRAEIRDQLVRMHLPLVE
YLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTIVGEIKRHFRDKGW
AIRVPRRLQELKLSLTKATSELSQTLGRSPTVSEIAAHLQMSEEEVLEGLESANAYSAVS
LDAPDSGDDEAPAVADTLGVQDESLEGVEYRESLKPLLEKLPPREKRILLLRFFGNMTQS
QIATELGISQMHVSRLLARTLAQLRRGLLDDT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtggccacgaccaggcaacgctcgaaggcctttctcgacgacagccacgatcttttcctc
gccgcggacgaggaggccacggacgagacgtcgcccggcacaccggtggcggaggccgcc
ctggcgccacgctcgcccaggccggcgacggtcgcggcccagggccatcccaaaaatgat
cgctccgactccgacgccgacgccgacgccggtcattccggccatgaccatcccggtgag
accaacgatcgggtgcgtgcccgggagctgttcacccaactggtcgcccttcccgagggg
gaccagcagcgagccgagatccgcgaccagctcgtccggatgcacctgccgctcgtcgag
tacctcgcgcgccgtttccgcaaccgcggcgagcccctggacgatctgacccaggtggcg
acgatcggcctgatcaagtcggtggaccgcttcgatcccgagcgtggcgtggagttctcc
acctacgcgacgccgacgatcgtcggcgagatcaaacggcacttccgggacaagggctgg
gcgatccgagtcccgcggcggctccaggaactcaagctgtcgctgaccaaggccacctcg
gaactctcccagacgctcggccgctcaccgacggtcagcgagatcgcggctcatctccag
atgagcgaggaggaggtgctggagggcctggagtccgccaacgcctactcggcggtctcc
ctggacgcaccggactccggcgacgacgaggccccggcggtggccgacaccctgggcgtc
caggacgagtccctcgagggagtcgagtaccgggagtcgctcaagccgctgctggagaag
ctgcccccacgggagaagcgcatcctgctgctgcggttcttcggcaacatgacccagtcg
cagatcgccaccgagctcgggatctcccagatgcacgtctcgcggctgctcgcccgcacg
ctggcccaactgcgccgcggcctgctggacgacacctga
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