Candidatus Protofrankia datiscae: FsymDg_1514
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Entry
FsymDg_1514 CDS
T01530
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FsymDg_1514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_1514
Enzymes [BR:
fsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FsymDg_1514
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FsymDg_1514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AEH08974
UniProt:
F8B2Z0
LinkDB
All DBs
Position
complement(1778462..1779739)
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AA seq
425 aa
AA seq
DB search
MVGSRSGHGPVFLLAFGRPPAPGAAAGDVPADRSDRLAAGRRQRPAAHAPVRGHRAPPAR
GHRFAGTTVVRGGADGLTSDGVRVATWNINSAKARQARLIEWLDRAQPDVVCLQETKLSD
AAFLELFDEDLFRRGYRVAHHGDGRWNGVAIFSRAGLDDVEAGLADGPGFPAPEPRALAA
TCGGIRIWSLYVPNGRAVDDPHYAYKLTWLAALRASVEKALTTAPVIACGDFNIAPTDAD
VWDPAAFAGATHVTDAERRALRELTDLGLVDVMRRRWPDEQVFTYWDYRALMFPKNMGMR
IDLLLASDSLVDRVRAVWVDRQARKGTGTSDHAPVIVDLDEAPDGDIGPMVPPPSPPRAA
GTRRRAPGGPGRTGAGRTAAEPNAPGRHRAGPDTAGPGVTKPDVTSPDAADTGTLEAGGT
DTRAN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtggtcggaagccgtagtgggcatggtccggtcttcctcctggcgttcggcaggccgcca
gctcctggcgctgccgcgggcgatgtcccggccgatcgtagcgatcgcctggcggccggc
cgccggcagcggccagcagcccacgcaccggtccgtgggcaccgggcgccgccggcccgt
ggccatcggttcgcgggtaccactgtcgtcaggggcggcgccgacggactaacgtcggat
ggtgtgcgggtggcaacctggaacatcaactcggcgaaggcgcggcaggcccgtctgatc
gaatggctggaccgggcccagccggacgtcgtgtgcctccaggagaccaagctctccgac
gcggccttcctcgagctcttcgacgaggatctcttccggcgcggttaccgtgtcgcccac
cacggtgacggacgctggaacggcgtcgcgatcttctcacgggccgggctcgacgacgtc
gaggccgggctcgcggacggcccgggcttccccgcgcccgaaccgcgggcgctcgccgcg
acctgcggcggcatccggatctggtcgctgtacgtgccgaacgggcgcgcggtcgacgat
ccgcactacgcgtacaagctcacctggctcgccgcgctgcgcgcgtccgttgagaaggcc
ctcacgaccgctccggtgatcgcctgcggcgacttcaacatcgctccgaccgatgccgac
gtctgggatcccgccgccttcgccggtgccacgcacgtcaccgacgccgagcggcgggcg
ctgcgtgagctgaccgacctcggcctggtcgacgtcatgcgcagacgctggccggacgag
caggtcttcacctactgggactaccgggcgctgatgttcccgaagaacatgggtatgcgt
atcgatctcctcctcgccagcgacagcctggtcgaccgggtacgcgcggtgtgggtcgac
cgacaggcccgcaagggcacgggcacctccgaccacgcgccggtgatcgtcgaccttgac
gaggcaccggacggcgacatcggcccgatggtcccgcccccgtccccaccgcgggcggcc
ggcacccggcgccgcgcaccgggaggcccgggacggacgggggcgggacgaaccgcggcg
gaaccgaacgcgccaggccgccatcgcgccggccccgacaccgccggcccaggtgtcacg
aagccggacgtcaccagcccggatgccgcggatacgggcaccctggaggcgggcggcacg
gatacccgagcgaactga
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