Candidatus Protofrankia datiscae: FsymDg_1629
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Entry
FsymDg_1629 CDS
T01530
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FsymDg_1629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_1629
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FsymDg_1629
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FsymDg_1629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
EhaF
Motif
Other DBs
NCBI-ProteinID:
AEH09085
UniProt:
F8B4N3
LinkDB
All DBs
Position
1918984..1919715
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AA seq
243 aa
AA seq
DB search
MPVYRDEGVVLRTTPLAEADRIITVLTRRTGRIRAVAKGVRRTSSRFGARLEPGTYVDLQ
LYEGRSLDTVTQADILSPYGAVIASDYPRHTAAAVMLETAERLTSEERQPAMRLFLLLVG
GLRTLAQGERAPSLVLDAFLLRALTIAGYGMALADCAHCGDPGPHHAFSVPAGGVVCPEC
RPHGAVSMSPAAVKLLSDLLTGDWDRAGISEARTRREAGGCIAAYLQWHLEYGLRTLPHL
ERV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtctatcgagatgaaggtgtcgtcctgcggacgacgccgctggccgaagccgac
cgcatcatcaccgttctgactcggcggaccgggcggatacgcgcggtggccaagggggtg
cgtcgcacgtcgtcccgcttcggcgcgcggctggagccgggtacctatgtcgatctccag
ctctacgaggggcgctctctcgacaccgtcacccaggccgacatactcagcccgtatggc
gcggtgatcgcgtcggactatccccggcacaccgcggcggcggtcatgttggagaccgcc
gagcggctgaccagcgaggaacgccagccggcgatgcggctgttcctgctcctcgtcggt
ggcctgcgcacgcttgcccagggtgagcgggcaccgtccctcgtcctggacgcgttcctg
ctccgggcgttgaccatcgccggttacgggatggctctggcggactgtgcccactgcggt
gaccctggaccccaccacgcgttctccgtcccggcgggaggcgtagtgtgcccggaatgc
cgaccgcatggagcggtgtcgatgtccccggccgctgtgaagctgctgtccgatctgctc
accggggactgggaccgcgccgggataagcgaggcccgtacccggcgcgaggccggcgga
tgcattgccgcctaccttcagtggcatctcgaatacggattgcgcacattgccccatctg
gagcgggtgtga
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