Candidatus Protofrankia datiscae: FsymDg_1644
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Entry
FsymDg_1644 CDS
T01530
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FsymDg_1644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsy03021
]
FsymDg_1644
Transcription machinery [BR:
fsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FsymDg_1644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2408
Motif
Other DBs
NCBI-ProteinID:
AEH09100
UniProt:
F8B4P8
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All DBs
Position
1938585..1939763
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AA seq
392 aa
AA seq
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MSPAVLPREAQVDEVKDLITRGKEIGFLTTEDVTVALQAAELPPEQTDAVLQVLNDEGIE
ILEAGGEDAEENDLLARRRREEEELALKAPTSDPVRMYLKEIGKVPLLTAEEEVDLAKRI
EAGLFASEKLAAATRKTSPQMRRDLEAIERDGQIAKRKLVEANLRLVVSIAKRYVGRGML
FLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMVETI
NKLIRIQRQLLQDLGREPSPEEIAKEMDLTPDKVREILKVSQEPVSLETPIGEEEDSHLG
DFIEDCDAVVPVDAASFILLQEQLDSVLHTLSDREKKVIQLRFGLTDGHPRTLEEVGREF
GVTRERIRQIESKTLSKLRHPSRSQKLRDYLE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagccgtcctaccgcgcgaagcccaggtggacgaggtcaaggacctcatcacc
cgaggcaaggagatcggtttcctcactaccgaggacgtcacggtcgccctccaggcggcc
gagctgccaccggagcagaccgacgccgtcctgcaggtcctcaacgacgagggcatcgag
attctcgaggcgggtggggaggacgccgaggagaacgacctgctcgcccggcgtcgtcgt
gaggaggaggagctggcgctcaaggcgccgacctccgacccggtgcgcatgtacctcaag
gagatcgggaaggtcccgctgctgaccgcggaggaggaggtcgacctcgccaagcggatc
gaggccggcctgttcgcctccgagaagctcgcggcggccacccgcaagacctccccgcag
atgcgccgcgacctggaggcgatcgaacgtgacgggcagatcgccaagcgcaagctcgtc
gaggcgaacctgcggctggtggtgtcgatcgccaagcgctacgtgggccgcggcatgctg
ttcctggacctcatccaggagggcaacctcggtctgatccgcgcggtggagaagttcgac
tacaccaagggctacaagttctccacctacgccacctggtggatccggcaggcggtcacc
cgggccatcgccgaccaggcacgcaccatccgcatcccggtgcacatggtcgagacgatc
aacaagctgatccgcatccagcggcagctcctgcaggacctcggtcgtgagccgagcccg
gaggagatcgccaaggaaatggatctcacacctgacaaggtgcgtgagatcctcaaggtg
tcccaggagccggtctccctggagacgccgatcggtgaggaggaggactcccacctcggc
gacttcatcgaggactgcgacgcggtcgtgccggtcgacgcggccagcttcatcctgctg
caggagcagttggattccgtcctgcacacgctctccgaccgggagaagaaggtcatccag
ttgcgcttcgggctcaccgacggccacccgcgcacgttggaggaggttggccgggagttc
ggggtcacccgcgaacgcatcaggcagatcgagtcgaagacgctgtcgaagctgcgccac
ccgtcccggtcccagaagctgcgcgactacttggagtag
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