Candidatus Protofrankia datiscae: FsymDg_1734
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Entry
FsymDg_1734 CDS
T01530
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FsymDg_1734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fsy02000
]
FsymDg_1734
Transporters [BR:
fsy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FsymDg_1734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEH09183
UniProt:
F8B5L3
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All DBs
Position
2042242..2043957
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AA seq
571 aa
AA seq
DB search
MAVSWRRRSGEDTDRNISGSADGNSAGRRGPRWRAATVSLLTVAFLAACGGGDGGSGTNA
DNAQPVPGGRLKIAFWADFQGCIDPNQVYWIESRSIDRNFADSLTDQDPRTGEIVPWLAT
SWTASPDAREYTFTLRKGVTFSDGTPLDASAVKTALDGVRGLGAKSTLGVTYLAGYESST
VVDPQTVKVNFSAPNAAFLQATSTTTLAILSPATYKETAEARCAGKVIGSGQFVLDSYNV
TKAIKLSRRAGYAWPSALVKNQGDAYLDGIDVSYIAEDSVRVGSLTTGTIDVAWPRLPIT
SADQEVIKAANGVIETRSLPGISAQIVPNVNRGGPLADLKVRQALYKAIDLKSYASTVYW
DGYPVVKGPYDSTTPYAADLSAKLAHDPAGAAALLDSAGWAKGSDGYRYKDGRKLTLTYL
IISSTPGEQLLQDQLKKSGVDLQLKVLTNAQYTQLTTAGEFDLAGSYLTRGDPSVLGSTL
DRAVSKNYATVYSQDDATAAEVSRLFARGLNTIDPARRAAAYKDLQDYLIDHGVVFPTYD
RVQVVGLSNKVHGFAWTSESFLRANDIWLSK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatcgtggcgtcgccgaagtggcgaggacaccgacagaaatatcagcggcagc
gccgacggaaacagcgcgggccgacgcggcccgcgctggcgggcggcgaccgtctccctc
ctcaccgtcgccttcctggccgcctgtgggggcggggacggcgggagtggtacgaacgcc
gacaacgcgcagcccgtgccgggcggccggctgaagatcgccttctgggcggacttccag
ggctgcatcgaccccaaccaggtgtactggatcgaaagccgcagcatcgaccgcaacttc
gccgactcgctgaccgaccaggaccccaggaccggtgagatcgtcccgtggctcgccacg
agctggacggccagccccgacgcccgcgagtacaccttcaccctgcgcaagggcgtcacc
ttcagcgacggcacgccgctcgacgcgtccgcggtgaagacggccctcgacggggtgcgc
ggcctcggcgccaagtcgaccctgggcgtgacctacctcgccggctacgagtcgtcgacc
gtcgtcgacccgcagacggtcaaggtgaacttcagcgcgcccaacgcggcgttcctccag
gcgacgtccaccaccaccctggcgatcctctcgccggccacctacaaggagaccgccgag
gcccgctgcgcgggcaaggtcatcggctcaggacagttcgtgctcgacagctacaacgtc
accaaggcgatcaagctcagccggcgcgcgggttacgcgtggccgagcgcgctggtgaag
aaccagggtgacgcgtacctcgacggcatcgacgtcagctacatcgccgaggacagcgtc
cgggtgggcagcctgaccaccggcaccatcgacgtcgcctggccgcggctgccgatcacc
tccgccgaccaggaggtcatcaaggccgcgaacggcgtcatcgagacacgctccctgccc
ggcatcagcgcgcagatcgtgcccaacgtcaacaggggcggcccgctggccgacctgaag
gtgcgccaggcgctgtacaaggcgatcgacctgaaaagctacgcgtccaccgtgtactgg
gacggctacccggtggtgaaggggccgtacgactcgacgacgccgtacgcggcggacctg
tccgccaagctcgcccacgacccggccggggcggccgcgctgctggacagcgccggctgg
gccaagggctcggacggctaccgctacaaggacggccggaagctgacgctgacctacctc
atcatctcctcgacccctggcgaacagctgctccaggaccagctcaagaagagcggcgtc
gacctccagctcaaggtcctaaccaacgcgcagtacacccagctgaccaccgctggtgag
ttcgacctcgcgggcagctacctgacccgcggcgacccgagcgtgctcggctcgaccctc
gaccgggccgtctcgaagaactacgccaccgtgtactcccaggacgacgccacagccgcc
gaggtcagcaggctgttcgcccgcgggctgaacacgatcgacccggcccggcgcgccgcg
gcgtacaaggatctgcaggactacctgatcgaccacggggtcgtcttcccgacctacgac
cgggtgcaggtggtcgggctgtcgaacaaggtccacgggttcgcctggacctccgagagc
ttcctgcgcgccaacgacatctggctgtcgaagtga
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