Candidatus Protofrankia datiscae: FsymDg_1856
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Entry
FsymDg_1856 CDS
T01530
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy00300
Lysine biosynthesis
fsy00470
D-Amino acid metabolism
fsy01100
Metabolic pathways
fsy01110
Biosynthesis of secondary metabolites
fsy01120
Microbial metabolism in diverse environments
fsy01230
Biosynthesis of amino acids
Module
fsy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FsymDg_1856
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FsymDg_1856
Enzymes [BR:
fsy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FsymDg_1856
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AEH09299
UniProt:
F8B6J5
LinkDB
All DBs
Position
complement(2198825..2200162)
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AA seq
445 aa
AA seq
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MDRFTYRDGVLYVEDVAVEDIAARFGTPVYVYSHGTLVTHLRQVADAFADLAPLICFSVK
ALSNIHLLRGLAAAGAGVDVVSGGELYRALLAGVPAQRIVFAGVGKSDEELRYAVRSGIR
CVNVESEGEMRALARAAAECRMPAGAAVRVNPDVAVGSRTPAKTTTGRRGGKFGIDLDRV
HEVYRLAVDDEWLRPEGLHFHLGSPVFHPRAYGDAVDKVLTVTEKLTADGAPVPTINIGG
GFPADYEGSGVPGWSDFAAVIAPKLRSFVAAGGTVVMEPGRSIAANAGVLLASVRYLKTS
GSRNVVITDTGMSHLIRTAFYDTFHFLWPARPRNGLSPVGRTGEHDQPDLARYDVAGPLC
ESSDYLAKDRLLPSLRPGDVLAIFTAGAYGMTMASHYNSLPRPAEVLVDGGDVRLIRRRE
TYEDLVSAEVDAEAGPAAAGTTKPA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtttcacgtaccgggacggcgtgctgtacgtggaggacgtggccgtggaggac
atcgcggcccgtttcggcactccggtctacgtgtactcccacggcaccctcgtcacccac
ctgcggcaggtggcggacgccttcgccgacctcgcgccgctgatctgcttctcggtcaag
gcgctgagcaacatccacctgctgcggggcctcgcggcggcgggcgcgggcgtggacgtg
gtcagcggcggcgaactgtatcgggcgctgctggccggggtgcccgcacagcggatcgtc
ttcgccggcgtgggcaagtccgacgaggagctgcggtacgcggtgcgctccggcatccgc
tgcgtcaacgtggagtccgagggtgaaatgcgcgccctcgcccgggcggcggccgagtgc
cggatgccggcgggggcggccgtgcgggtcaacccggacgtcgcggtgggttcccgcacc
ccggccaagaccacgaccgggcgtcgcggcggcaagttcgggatcgacctcgaccgggtg
cacgaggtgtaccggctggccgtggacgatgagtggctgcggccggagggcctgcacttc
cacctcggttccccggtcttccacccgcgggcctacggcgacgccgtggacaaggtgctg
accgtgacggagaagctgacagccgacggcgcccccgtcccgacgatcaacatcggtggt
ggtttccccgcggactacgagggatccggcgtcccgggatggtcggacttcgccgccgtg
atcgcgccgaagctgcgctccttcgtggccgccggcggcacggtcgtcatggaacccggc
cgttcgatcgcggccaacgccggcgtgctgctggccagcgtgcgctacctgaagacctcc
ggctcgcggaacgtcgtgatcaccgacaccgggatgagccacctgatccggaccgccttc
tacgacacgttccacttcctgtggccggcccggccgcgcaacggactgtccccggtgggc
cgtaccggcgagcacgaccagccggacctggcacgctacgacgtcgcgggcccgctgtgc
gagtccagcgactacctcgcgaaggaccggctcctcccgtcgctgcggcccggggacgtc
ctggccatcttcaccgccggcgcctacggcatgacgatggccagccactacaacagcctt
ccccgccccgcggaggtgctggtcgacggtggggacgtccggctgatccggcggcgtgag
acctacgaggacctcgtctcggcggaggtggatgcggaggccgggcccgccgcggccggg
acgacgaagccagcatga
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