Candidatus Protofrankia datiscae: FsymDg_2135
Help
Entry
FsymDg_2135 CDS
T01530
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy03030
DNA replication
fsy03410
Base excision repair
fsy03420
Nucleotide excision repair
fsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FsymDg_2135
03410 Base excision repair
FsymDg_2135
03420 Nucleotide excision repair
FsymDg_2135
03440 Homologous recombination
FsymDg_2135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsy03032
]
FsymDg_2135
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_2135
Enzymes [BR:
fsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FsymDg_2135
DNA replication proteins [BR:
fsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FsymDg_2135
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FsymDg_2135
NER (nucleotide excision repair)
GGR (global genome repair) factors
FsymDg_2135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
NYN_YacP
HHH
Motif
Other DBs
NCBI-ProteinID:
AEH09547
UniProt:
F8B4C6
LinkDB
All DBs
Position
2540016..2542814
Genome browser
AA seq
932 aa
AA seq
DB search
MPATTTTSGKPTVGKAAAGRPSRAVSARPAAGAAPAAGAAAGEPRLLLLDGHSLAYRAFF
ALPVENFSTTTGQPTNAVYGFTSMLINVLRDERPTHVAVAWDLPTPTFRHTQYAEYKAGR
AETPADFVGQVSLIHQVCDSLAVPGVTAAGYEADDVIATLATQGAALGMQVLVVTGDRDA
LQLVDERVTVLMTRRGISDMTRFTPAEVEAKYGLTPTQYPDFAALRGDPSDNLPSVPGVG
EKTATKWIQQFGSLAALVDRADEVGGKAGASLRAHLANVIRNRSLTELARDVPLAVTPTD
LQLRPWDREAVHQLFDTLQFRVLRERLYAALGTVEPEADAGFEVTAQTLAPGEVAGWLAA
HTGDGQRLGVYVRGSWGRGTGSVTGLAFATADGAGAGAWIDPVALTADDDAALAAWLADD
SRPKAVHDVKGPILALAARGFSLAGVTSDTALAAYLALPGQRTFDLADLVLRYLRRDLRP
ETSETGQLTIDGSDEAAAAAADVVRARATLELADALDADLARRGATALLRDVELPLVTVL
AGMERAGIAADTDHLLDLQKHYGAQVTEVAAQAQEIVGRPFNLSSPKQLQVILFDELGLP
KTKKIKTGYTTDADALAWLSTQADHPLLAVLLRHRDVARLRTVVDSLIPMIDDAGRVHTT
FNQMIAATGRLSSADPNLQNIPVRTAEGRQIRRAFVVGAGYESLLTADYSQIEMRIMAHL
SGDKGLIGAFASGEDLHTFVAAQAFGIPVDEVDPELRRRIKAMSYGLAYGLSAFGLAGQL
GIHPEEAREQMEAYFARFGGVRDFLRGVVERARADGYTETILGRRRYLPDLTSDNTQRRQ
MAERMALNAPIQGSAADIIKIAMLGVDRKLREHGARSRLLLQVHDELVLEIAPGERADVE
ALVRTEMGGAYQMSVPLEVSVGSGRTWDDAAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccacgaccacgacttccggcaagcccaccgtcggcaaggctgccgccggccgg
ccgtcgcgcgcggtgtccgcccggccggcggccggcgcggcgccggcggcgggggccgcg
gcgggtgaaccgcggctgctcctcctcgacggtcactccctggcctaccgggcgttcttc
gcgctgccggtggagaacttctccaccacgacggggcagccgaccaacgccgtctacggc
ttcacctcaatgttgatcaacgtgctgcgggacgagcggcccacccacgtcgcggtggcc
tgggacctgccgacgccgaccttccggcacacccagtacgccgagtacaaggcgggacga
gccgagacgcccgcggacttcgtcgggcaggtcagcctcatccaccaggtgtgcgactcc
ctggccgtccccggggtcaccgccgccgggtacgaggccgacgacgtcatcgccacgctc
gccacccagggcgcggccctgggcatgcaggtcctcgtcgtcaccggcgaccgggacgcg
ctgcagctcgtcgacgagcgggtgacggtcctgatgacccggcgtggcatcagcgacatg
accaggttcacccccgccgaggtcgaggcgaagtacggcctcaccccgacgcagtacccg
gacttcgccgcgctgcgcggggacccgtcggacaacctgccgtcggtgcccggggtgggg
gagaagaccgccaccaagtggattcagcagttcgggtcgctggccgcgctggtggaccgg
gccgacgaggtcggcgggaaggcgggcgcgtcgctgcgcgcacacctggccaacgtgatc
cgtaaccgctcgctgaccgagctggcccgtgacgtgccgctggcggtcacccccaccgac
ctccagctccggccgtgggacagggaggccgtccaccagctcttcgacaccctgcagttc
cgggtgctgcgggagcggctgtacgcggcgctgggcacagtcgagcccgaggccgacgcg
ggctttgaggtgaccgcgcagacgctcgcaccaggggaggtggccggctggctggccgcg
cacaccggcgacgggcaacgcctcggcgtgtacgtccggggcagctggggccggggcacc
ggcagcgtgaccggtctcgcgttcgccaccgccgacggtgccggcgccggtgcctggatc
gaccccgtcgcgctcaccgcggacgacgacgcggcgctggccgcctggctggccgacgac
agccggcccaaggccgtccacgacgtcaaggggcctatcctcgcgctcgccgcccgcggc
ttctccctcgccggcgtcaccagcgacaccgcgctcgccgcctacctggccctgcccggc
cagcgcaccttcgacctcgccgacctcgtcctgcgctacctgcgacgcgacctgcgcccg
gagacgtccgagacagggcagctgaccatcgacgggtcggacgaggcggccgcggccgcc
gccgacgtcgtgcgggcccgcgcgacgctggagctcgccgacgccctcgacgccgacctg
gcccgccgcggtgccaccgcgctgctgcgcgacgtcgagctcccgttggtcacggtgctc
gccgggatggaacgggccgggatcgcggccgacaccgaccatctgctcgacctccagaag
cactacggcgcgcaggtgaccgaggtggccgcgcaggcccaggagatcgtcggccggccg
ttcaacctcagctcgcccaagcagctgcaggtgatcctcttcgacgagctgggcctgccg
aagaccaagaaaatcaagaccggctacaccaccgacgcggacgcgctggcctggctttcc
acccaggccgaccatccgctgctggccgtgctcctgcgccaccgggacgtcgcccggctg
cgcacggtggtggattcgctcatcccgatgatcgacgacgccggccgggtccacacgacg
ttcaaccagatgatcgcggcgaccggccggctgtcctcggccgaccccaacctgcagaac
atcccggtgcgcaccgccgagggccgccagatccgccgggcgttcgtcgtcggcgcgggg
tacgagtccctgctcacggccgactactcccagatagagatgcgcatcatggcgcacctc
tccggtgacaaggggctgatcggggcgttcgcctccggtgaggacctgcacacgttcgtc
gcagcccaggcgttcggcatcccggtggacgaggtcgacccggagctgcgccgccggatc
aaggccatgtcctacgggctggcctacggcctgtcggcgttcgggctcgccggccagctc
ggcatccatccggaggaggcccgtgagcagatggaggcgtacttcgcccggttcggcggg
gtgcgggacttcctgcgcggcgtggtcgaacgggcccgcgcggacggctacaccgagacc
atcctcggccgccgccgctaccttcccgatctgaccagtgacaacacgcagcgacggcag
atggccgagcggatggcgctcaacgcccccatccaggggtccgcggccgacatcatcaag
attgcaatgctcggtgtcgaccggaagctacgggagcacggggcgcggtcgcgactgctg
ctgcaggtgcacgacgagctcgtcctggagatcgccccgggcgagcgcgccgatgtcgag
gcgctggtgcggaccgagatgggtggggcctaccagatgtcggttcctctcgaggtcagc
gtcggttccggccgtacgtgggacgacgcggcacactga
DBGET
integrated database retrieval system
