Candidatus Protofrankia datiscae: FsymDg_2165
Help
Entry
FsymDg_2165 CDS
T01530
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FsymDg_2165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_2165
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FsymDg_2165
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FsymDg_2165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
AAA_21
AAA_16
nSTAND1
RsgA_GTPase
AAA_25
AAA_33
AAA_22
NACHT
Viral_helicase1
DnaJ_CXXCXGXG
cobW
DUF3090
NTPase_1
Septin
Motif
Other DBs
NCBI-ProteinID:
AEH09575
UniProt:
F8AYY7
LinkDB
All DBs
Position
2586647..2589634
Genome browser
AA seq
995 aa
AA seq
DB search
MADRLVVRGAREHNLRDVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARAGRPH
CPTCGRPISRQTPQQIVDRLLELPAGTRFQVLAPVVRGRKGEYVDLFAELQAKGFARVRV
DGGVHALTDVPKLEKQRKHTIEVVVDRLAVKASAKQRLTDSVETALGLGGGLALVDFVDR
DPADPDRERMYSEHLACLYDDLSFEELEPRSFSFNSPYGACAHCSGLGTRKEVDPDLVVP
DPSLSLAAGAVAPWSAGHNKEYFTRLLEALAADLGFRMDIPWEGLPERARKAVLYGRGET
EVQVSYTNRYGRSRQYYTAFEGVVSFLQRRHREAESDSSRERYEGYMRDVACSACRGARL
KPESLAVTLSGRSIAEIAGMAIGECAGFLRTLELTARERTIAGRVLKEIDARLAFLLDVG
LDYLSLDRAAGTLAGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIQTLVRL
RDLGNTLIVVEHDEDTIRAADWVVDIGPGAGEHGGKVVVSGSVDALLSAEASLTGAYLSG
RREIPVPDIRRQPTRGRALTVHAAREHNLREVTVSFPLGCFVAVTGVSGSGKSTLVNDIL
ATVLANRLNGAREVPGRHRTVTGVEHLDKAVRVDQSPIGRTPRSNPATYTGVFDHIRRLF
AETTEAKVRGYLPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCQGARYNRET
LEVHYKNRSIAEVLDMPIEEAAEFFAAVPAIARHLRTLDDVGLGYVRLGQPAPTLSGGEA
QRVKLAAELQRRSTGRTVYVLDEPTTGLHFEDIRKLLGVLGRLVDAGNTVIVIEHNLDVI
KTADWIIDMGPEGGTGGGRVVAEGPPETVAAIEESHTGLFLREIFGQRLDTAQGNAMALP
PATASSAKTPAARGAVSGQRSPRTPLRPAADAVAG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccgtctcgtcgtgcgcggcgcgcgagagcacaacctgcgtgacgtcgacctc
gacctgccgcgggactcactgatcgtcttcaccggtctgtcgggttcgggcaagtccagc
ctcgcgttcgacacgatcttcgccgaggggcagcgacggtacgtcgagtcgctgtcggcc
tacgcccgccagttcctcggccagatggacaagcctgacgtcgacttcatcgagggcctg
tcaccggcggtctccatcgaccagaagtcgacctcgcgcaacccccgttccaccgtgggg
acgatcactgaggtgtacgactatctgcggctgctgttcgcgcgggcgggccggccgcac
tgcccgacatgcggccggccgatctcccggcagaccccgcagcagatcgtcgaccgcctg
ctcgagctgcccgcgggtacccggttccaggtgctggccccggtcgtgcggggacgcaag
ggcgagtacgtcgacctgttcgcggagctgcaggccaagggcttcgcccgggtgcgcgtc
gacggcggcgtccacgcgctcaccgacgtgccgaagctggagaagcagcgcaagcacacc
atcgaggtggtggtcgaccggctggcggtgaaggcgtccgccaaacagcgcctgacggac
tccgtcgagaccgcgctcggcctcggcggcggtctggcactggtcgacttcgtcgaccgg
gaccccgccgaccccgaccgcgagcggatgtactccgagcacctggcctgcctgtacgac
gacctgtcgttcgaggagctcgagccgcggtcgttctccttcaactccccgtacggcgcc
tgcgcgcactgctcgggcctgggcacccgcaaggaggtcgaccccgacctggtcgtcccc
gacccgtcgctgtcgctggcggccggcgcggtcgccccctggtcggccggccacaacaag
gagtacttcacccggctcctcgaggccctcgccgccgacctcggcttccggatggacatc
ccctgggaggggctgccggaacgggcccgcaaggcggtgctgtacgggcggggcgagacc
gaggtccaggtctcctacaccaaccgctacggccgctcccgccagtactacacggccttc
gagggcgtcgtctccttccttcagcgccgccaccgcgaggccgagtcggacagcagccgg
gagcgctacgagggctacatgcgcgacgtcgcctgctcggcctgccgcggcgcccggctc
aaacccgagtcgctggcggtgacgctgagtggccggtcgatcgccgagatcgccggcatg
gccatcggggagtgcgccgggttcctgcgcaccctcgagctcaccgcgcgagagcgcacg
atcgccggccgggtgctcaaggagatcgacgcgcggctggcgttcctgctcgacgtcggc
ctcgactacctctcgctggaccgggccgccggcaccctggccggcggtgaggcgcagcgg
atccggctcgccacccagatcggctccgggctggtcggcgtcctctacgtgctcgacgag
ccctcgatcgggctgcaccagcgggacaaccgccgtctcatccagaccctggtacggctg
cgggacctcggtaacaccctgatcgtcgtcgagcacgacgaggacacgatccgggccgcc
gactgggtcgtcgacatcggccccggagccggggagcacggcgggaaggtcgtcgtctcc
ggctcggtggacgcgctgctgtccgcggaggcctcgctgaccggggcgtacctgtccggc
cgccgtgagatcccggtgcccgacatccggcggcagccgaccaggggccgcgcgctgacc
gtccacgccgcccgggagcacaacctgcgcgaggtgacggtgtcattcccgctcggctgc
ttcgtcgcggtcaccggcgtctccggttcgggcaagtcgaccctggtcaacgacatcctc
gccacggtgctcgcgaacaggctcaacggcgcccgggaggtgccgggccggcaccgcacc
gtcaccggtgtcgagcatctcgacaaggccgtccgggtcgaccagtcaccgatcgggcgc
accccgcgctcgaacccggccacctacaccggcgtcttcgaccacatccggcggctgttc
gccgagaccaccgaggccaaggtccgcggctatctgcccgggcgcttctcgttcaacgtc
aagggcggccggtgcgaggcctgcgccggcgacggcacgatcaagatcgaaatgaacttc
ctgccggacgtgtacgtgccgtgcgaggtctgccagggcgcccggtacaaccgggagacg
ttggaggtccattacaagaaccgcagcatcgccgaggtcctcgacatgccgatcgaggag
gccgcggagttcttcgccgccgttcccgcgatcgcccggcacctgcgcaccctcgacgac
gtggggctgggctacgtccgcctcgggcaaccggcgccgacgctgtccggtggcgaggcg
cagcgggtcaagctcgccgccgagctccagcggcgctccaccggacgcaccgtctacgtc
ctggacgagcccaccaccgggctgcacttcgaggacatccgcaagctgctcggggtcctc
ggccggctggtcgacgccggcaacacggtgatcgtcatcgagcacaacctggacgtcatc
aagaccgccgactggatcatcgacatggggccggagggcggcaccggcggcggccgggtg
gtcgccgaggggccgcccgagacggtcgcggcgatcgaggagagccacaccggcctcttc
ctgcgggagatcttcgggcagcgcctggacacggcccagggcaacgccatggcgctgcct
ccggccacggcatcctcggcgaaaaccccggccgcgcggggggccgtctcaggtcagcgg
tcgccacgcaccccactgcgccccgccgcggatgccgtggcgggatag
DBGET
integrated database retrieval system
