Candidatus Protofrankia datiscae: FsymDg_2550
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Entry
FsymDg_2550 CDS
T01530
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FsymDg_2550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_2550
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FsymDg_2550
RecFOR pathway proteins
FsymDg_2550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
HHH
RuvA_C
RecR_HhH
HHH_3
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AEH09914
UniProt:
F8B306
LinkDB
All DBs
Position
complement(3027788..3028582)
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AA seq
264 aa
AA seq
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MIASVAGTVAALSPDAAVVEVGGVGLLVQCAPATLAGLRVGQQARLVTTLVVRETELTLY
GFADADERDVFETLQSASGVGPRLAQAVLGVHSPDSVRRAVAAEDLAALTKVPGIGRKGA
QRIVLDLRDRLGPPVPAPAAGDDGVGVGGAGGDGAAPAAGTGVTAGEQVRLALLGLGYTA
READDALAAALADSLAITGADALAAVPAGNGHGNAGPGSRAGRAGPGDPRATATGTGRAG
SGRAETPDPVGVLLRRALAALRPR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcgtccgtggccgggacggttgccgccctgtcgcccgatgccgccgtcgtcgag
gtgggcggggtcgggctgctcgtccagtgcgcccccgcgaccctggccgggctgcgggtc
gggcagcaggcacggctggtcaccacgctggtcgtccgggagaccgagctgactctctac
ggtttcgccgacgccgacgagcgcgacgtcttcgaaaccctgcagagcgcctccggggtc
ggcccccggctcgcccaggccgtgctcggtgtccacagtccggacagcgtgcgccgcgcg
gtcgcggcggaggatcttgcggctctgacgaaggtgcccggcatcggccgcaagggcgcg
cagcgcatcgtcctcgacctcagggacaggctcggcccgcccgtaccggcgccggccgcg
ggggatgacggtgtgggtgtgggcggggccggcggtgacggtgccgcgccggccgcgggc
acgggtgtcaccgccggcgagcaggtccgcctcgcgctgctcgggctcggctacaccgcg
cgggaggccgacgacgcgctggccgccgcgctggccgattccctggccatcaccggggcg
gatgccctggccgcggtcccggccggcaacggccacggcaatgccgggccgggcagccgc
gcgggccgtgccggccccggtgacccacgggccaccgccaccggcaccggccgggcgggc
agcggccgtgccgagacaccggatcccgtaggcgtgctgctgcgtcgggcgctggccgcc
ctgcggcctcggtaa
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