Candidatus Protofrankia datiscae: FsymDg_2622
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Entry
FsymDg_2622 CDS
T01530
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FsymDg_2622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fsy02000
]
FsymDg_2622
Transporters [BR:
fsy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FsymDg_2622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
nSTAND3
AAA
DUF87
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEH09979
UniProt:
F8B364
LinkDB
All DBs
Position
complement(3118506..3120851)
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AA seq
781 aa
AA seq
DB search
MTGPAGNISPAGSTSLAGKEGKEGKKRKTDKAGRVGRVGRVGRVDSALAESLLVVDGLDV
TFTTGGAAVHAVRDVSFTLDAGRCLALVGESGSGKSVTARTLVGLTGENAVLGARRLRFA
GEDLAAFTEARWRAVRGRRIGLVLQDALVSLDPLRTVGAEIAEVLRTHRVVPRAEIDARM
LKLLDDVGVPEPARRARQYPHELSGGLRQRALIASAIAAGPALVLADEPTTALDVTVQAQ
VLDLLRQHKIDGAALLLISHDLAVVGGLADDIAVMYAGHIVEHGPAEQILGDPRHPYTRA
LLDAVPVTHTKGTRLAPAASRGPLPGPAGCPYADRCPRADDRCRERLPARAVPAGAHHRH
DVLCWHPFEALSVEVLSVEVLAAEVLAAEVLAAEVPPARALSAGAPSFGAPSPGPATDTT
ATAEDWANTSGTEGAAATSGTAGAAGVVPTAALGAAVASPRPAAPGDATGVGIPPRPRVG
AAATGEALLEVEGVSRRFRSPDGTWRDAVRDVSLRLHAGETLGVVGESGSGKTTVARIVL
GQLEPDTGTVHFAGQPWSGLRERARRARRRRIQAIYQDPLGSFDPRYRVERIIGEAVAIG
GVPGDADPARASAPRGAARRARVVELLDQVGLPADVLRRRPLELSGGQRQRVAIARALAP
GPDLIVCDEPVSALDVSIQAQILDLLAGLQHDLGVALLFISHDLGVIHHASDRIIVMKDG
QVVETGDVTTVFARPAHAYTRQLLAAVPRPVGGRAAPPGPADAGPAPGAAPAAGSLSVVS
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcccggcgggcaacatcagcccggcgggcagtaccagcctggcaggcaaggag
ggcaaagagggtaagaagcgcaaaacagacaaggcgggcagggtgggcagggtgggcagg
gtgggcagggtggattcggcgctggcggagtccctgctggtcgtggacgggctcgacgtc
accttcaccaccggcggcgcggcggtgcacgccgtccgcgacgtctcgttcaccctggac
gcgggccgctgcctggcgctggtgggggagtccggctcgggcaagagcgtcaccgcgcgc
accctcgtcggcctcaccggtgagaacgccgtcctcggcgcgcgccggctgcgcttcgcc
ggggaggacctggccgcgttcaccgaggcgcggtggcgggccgtgcgcggccggcggatc
ggcctggtgctccaggacgcgctggtgtcgctggacccgctgcgcacggtcggcgccgag
atcgcggaggtgctgcgcacccaccgggtcgtcccccgtgccgagatcgacgcccggatg
ctgaagctgctcgacgacgtcggcgtgcccgagccggcccggcgcgcccggcagtacccc
cacgagctctccggcgggctgcgccagcgggcgctcatcgcctcggcgatagccgccggc
cccgccctggtgctggccgacgagccgaccacggcactggacgtgacggtgcaggcgcag
gtgctcgacctgctgcggcaacacaagatcgacggcgccgcactgctgctgatcagtcac
gacctcgccgtcgtcggcgggctcgccgacgacatcgcggtgatgtacgccggccacatc
gtcgaacacggcccggccgaacagatcctcggtgacccccgccacccctacacccgggcg
ctgctcgacgccgtgcccgtcacccacaccaagggcacccggctcgctcccgccgcctcc
cgcggcccgctgccggggccggcgggatgcccgtacgcggaccgctgcccgcgggcggac
gaccgctgccgcgaacgcctgccggcccgtgccgtgcccgcgggcgcgcaccaccggcac
gacgtgctgtgctggcacccgttcgaggcgctgtccgtcgaggtgctgtccgtcgaggtg
ctggctgccgaggtgctggctgccgaggtgctggctgccgaggtgccgcccgccagggcc
ctgtccgccggggcgccgtcgttcggcgcaccgtccccggggccggcaacggacaccacg
gcaacggcggaggactgggcgaacacttctggtacggagggcgccgctgccacttccggt
acggccggtgccgccggcgtcgtccccactgccgctcttggtgccgcggtcgcgtcaccc
cggccggcggccccgggtgacgcgaccggggtgggcatcccgcccaggccgcgggtgggc
gcggcagccaccggcgaggcgctgctggaggtcgagggtgtctccaggcgtttccgctcc
ccggacggcacctggcgggacgctgtacgggacgtgtcgttgcggctgcatgccggcgag
acgctgggtgtcgtcggcgagtccggctcggggaagacgaccgtggcccgtatcgtcctc
ggccagcttgagccggacaccgggacggtccacttcgccgggcagccgtggagcgggctg
cgagagcgtgcccgccgagcccgccgccgccgcattcaggcgatctatcaggatccgctg
ggctcgttcgatccccgctaccgcgtcgagcgcatcatcggcgaggcggtagccattggt
ggcgtcccaggggacgccgatccggccagagccagcgccccgaggggcgcggcccgccgg
gcccgggtcgtggaactgctcgaccaggtcgggctgcccgcggacgtgctgcgccgccgc
ccgctggagctctcgggcgggcagcggcagcgggtggcgatcgctcgcgcgctggccccc
gggcccgacctgatcgtctgcgacgagccggtgtccgccctcgacgtgtcgatccaggcg
cagatcctcgacctgctcgccgggctgcagcacgacctgggggtcgcgctgctgttcatc
tcccacgacctgggggtcatccaccacgccagcgaccgcatcatcgtgatgaaggacggc
caggtggtggagaccggtgacgtcaccacggtgttcgcccggcccgcgcacgcctacacc
aggcagctgctggccgccgtgccacgaccggtcggcgggcgcgccgcgccgcccggccca
gcggacgccggacccgccccgggcgcggcaccggccgcgggcagcctgagcgtggtgtca
cgatga
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