Candidatus Protofrankia datiscae: FsymDg_2744
Help
Entry
FsymDg_2744 CDS
T01530
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FsymDg_2744
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fsy02000
]
FsymDg_2744
Transporters [BR:
fsy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FsymDg_2744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEH10086
UniProt:
F8B4W3
LinkDB
All DBs
Position
3261618..3263177
Genome browser
AA seq
519 aa
AA seq
DB search
MISERHLSSVRRFRRGSVLGALLALAALLVSACGSQGTGSTAGSGGSATLKWATSYFPSH
WDPVVSGSGAQFRQLALVYASLTRTDDKGNAVPDLAQSWTYNDAGDEVTFHLRPNLTFSD
GTPVNAEAVKNAIERAKTQKNSALFGDLTSIRSVTANGDLDAVVHLTQVDHQIPLLLGER
VLQIASPQAAADPAKLDQNPVGAGPFIIEQLIPGTKAVLKKNPNYWDAANIHIDRVELVS
APDAATVVSGLQTGVYNFADLGQSPSQAKAATAAGLDVFVQPGFNASNISLNINKAPFNN
PKVVDAVRYAINRQEYVGKLTFGYGQATDQPFPEGYVAYDPKSKNLYPYSPEKSRQLLTE
AGYQPGQIKLDLVISTENPQAEIVQSQLAAIGITVNIKIDKNWATPFFAKDLTFSLYGTT
GRDSAAQTLTAHFGPDGPLNLSSPYEPAGFEEAIAKVRGTPLDAPEYPQVLQEATRAGLQ
SQALIFTHSSPNLFAKNKAISNLPRNPGHIDWTGVTIGD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgagcgacacctgtcgtccgtccgccgcttcaggcgtgggtcggtcctcggg
gccttgctggcgcttgcggccctgctggtcagcgcctgcggcagccagggcaccggctcc
accgcgggcagcggcggctcggccaccctgaagtgggccacctcctacttcccgagccac
tgggacccggtggtctccggcagcggtgcccagttccgccagctcgccctggtctacgca
tccctgaccaggacggacgacaagggcaacgcggtcccggacctggcccagagctggacc
tacaacgatgccggtgacgaggtcaccttccacctgcggccgaacctgacgttcagcgac
ggcaccccggtcaacgccgaggcggtcaagaacgcgatcgagcgggccaagacgcagaag
aactcggccctgttcggtgacctcacctcgatcaggtcggtcactgccaacggcgacctc
gacgccgtcgtccacctcacgcaggtcgaccaccagatcccgctcctgctcggcgagcgc
gtgctgcagatcgccagcccgcaggccgcggccgacccggcgaagctcgaccagaacccg
gtcggcgccgggccgttcatcatcgagcagctgattcccggcacgaaggccgtcctgaag
aagaacccgaactactgggacgcggcgaacatccacatcgaccgggtcgagctcgtctcg
gccccggacgcggccaccgtggtctccggcctgcagacgggtgtctacaacttcgcggac
ctggggcaatcgccgagccaggccaaggccgccacggccgccggcctggacgtcttcgtg
cagcccggcttcaacgcctcgaacatcagcctgaacatcaacaaggcgccgttcaacaac
ccgaaggtcgtcgacgccgtccggtatgcgatcaaccgccaggagtacgtcggcaagctc
accttcggctacggccaggcgaccgaccagccgttcccggagggctacgtcgcctacgac
ccgaagtcgaagaacctatacccctacagccccgagaagtccaggcagcttcttaccgag
gccggctaccagcccggccagatcaagctggacctggtcatttccacggagaacccgcag
gcggagatcgtgcagtcgcagctcgcggcgatcgggatcaccgtcaacatcaagattgac
aagaactgggcgacgccgttcttcgccaaggacctgacgttctcgctgtacggcacgacc
ggccgtgactccgcggcccagaccctcaccgcgcacttcgggccggacgggccgctgaac
ctcagctccccgtacgagccggcggggttcgaggaggcgatcgcgaaggtccgcgggacg
ccgctggacgcgccggaatacccgcaggtcctgcaggaggccacccgcgcggggctgcag
agccaggcgctgatcttcacccactcctcgccgaacctgttcgccaagaacaaggcgatc
tccaacctgccccgcaaccccggccacatcgactggaccggcgtcaccatcggtgactag
DBGET
integrated database retrieval system
