Candidatus Protofrankia datiscae: FsymDg_2880
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Entry
FsymDg_2880 CDS
T01530
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy00061
Fatty acid biosynthesis
fsy00071
Fatty acid degradation
fsy01100
Metabolic pathways
fsy01212
Fatty acid metabolism
fsy02024
Quorum sensing
fsy04146
Peroxisome
Module
fsy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FsymDg_2880
00071 Fatty acid degradation
FsymDg_2880
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FsymDg_2880
09145 Cellular community - prokaryotes
02024 Quorum sensing
FsymDg_2880
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fsy01004
]
FsymDg_2880
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fsy04147
]
FsymDg_2880
Enzymes [BR:
fsy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FsymDg_2880
Lipid biosynthesis proteins [BR:
fsy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FsymDg_2880
Exosome [BR:
fsy04147
]
Exosomal proteins
Exosomal proteins of breast milk
FsymDg_2880
Exosomal proteins of breast cancer cells
FsymDg_2880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
ANTAR
Motif
Other DBs
NCBI-ProteinID:
AEH10207
UniProt:
F8B6J8
LinkDB
All DBs
Position
complement(3416839..3418413)
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AA seq
524 aa
AA seq
DB search
MINELLASTPNRGTLHVTRLAGTREIPLAEVWRLSGLVAAGLRARGLGAGDRIGILAANS
LEWVVLDLAALRLKVVTAGLEPGKFTPTRELMERYSLSLLFTDRPCDVPGVERLTTLLDD
LPDAAGTAGTAGADDTSGADNTTGAAGAVGAAPPPPVRYAPDEITTIKFTSGSTGTPKGL
GATVGSIDSSLDAVQDMFGHGPGDNLLVFLPLSLLQQRYWVYSALRYGHDVTVCTYESAF
VALTQVRPTVVMGVPGFFESARGQIERHARRTGRDLADVARDIFGGRIRYLWTGSAPADP
ATLAFLNRLGLPIYEGYGLNETCIVAKNHPGAHRAGSVGRVLPGKEVIIGDDGVISVRAE
HPVNRRYDYCEPGDSERVFGTDGVVRTGDLGHLDADGFLFVLGRADDTIVLDNGRKIVVR
QIEEHLKASPAIAECVLYCPAQTELVAVVSPASVPVDTGAIAAQLTATNRALGGDQYIHR
VVVADEPFSIGNGLLTSQYKPRRKQIRAVYQRQLGDPRKGIHAA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaacgaacttctggcgtccacgccgaaccgtgggacgctgcacgtcaccaggctg
gccggcacccgcgagatcccactcgccgaggtctggcgactgtccggcctggtcgcggcc
gggctgcgcgcccgcggcctcggcgcgggcgaccggatcggcatcctcgccgccaacagc
ctcgagtgggtggtgctcgacctggccgccctgcgcctgaaggtcgtcaccgccggcctg
gaaccgggcaagttcacccccacccgcgaactgatggagcgctacagcctctccctgctg
ttcaccgaccgtccgtgcgacgtccccggcgtcgagcggctcacgaccctcctcgacgac
ctgcccgacgcggctggcacggctggcacggctggcgctgacgacacgtccggcgccgac
aacacgactggcgcggccggcgcggtcggcgcggccccgccgccaccggtcaggtacgcc
cccgacgagatcaccacgatcaagttcacctcggggagcaccggcacgcccaagggcctc
ggcgccaccgtcggcagcatcgacagctcgctggacgccgtccaggacatgttcggccac
ggccccggcgacaatctgctggtgttcctgccgctgtcactgctccagcagcgttactgg
gtgtactcggcgctgcggtacggccacgacgtcacggtctgcacctacgagtcggcgttc
gtcgcactcacccaggtgcggccgaccgtcgtcatgggcgtgcccggcttcttcgaaagc
gcccgcggccagatcgaacgccacgcccggcgcaccggccgggacctcgccgatgtggcc
cgcgacatcttcggcggccgcatccgctacctgtggacgggctcggcgcccgccgacccc
gccaccctcgcgttcctcaaccggctcggcctgccgatctacgagggctacggcctcaac
gagacgtgcatcgtggccaagaaccatccgggcgcgcaccgggcgggcagcgtcggccgg
gtgctgccgggcaaagaggtgatcatcggcgacgacggggtgatcagcgtccgtgccgag
cacccggtgaaccggcggtacgactactgcgagcccggcgacagcgagcgggtcttcggc
acggacggtgtcgtgcgcaccggcgacctcggacacctcgacgccgacggcttcctgttc
gtcctcggccgcgccgacgacacgatcgtgctggacaacggcaggaagatcgtcgtcagg
cagatcgaggagcacctgaaggccagcccggcgatcgccgagtgcgtgctctactgcccg
gcccagaccgagctggtggcggtcgtctcaccggcgtcggtgccggtggacaccggcgcc
atcgccgcgcagctcaccgccaccaaccgggcgctcggcggcgaccagtacatccaccgg
gtcgtggtggccgacgagccgttcagcatcggcaacggtctgctgacgtcccagtacaag
cccaggcgcaagcagatccgggcggtgtaccagcgccagctcggcgacccgaggaaggga
atccatgcggcctga
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