Candidatus Protofrankia datiscae: FsymDg_3093
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Entry
FsymDg_3093 CDS
T01530
Name
(GenBank) RHS repeat-associated core domain protein
Organism
fsy
Candidatus Protofrankia datiscae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
Tox-ART-HYD1
DUF6531
RHS
WXG100_2
WXG100
T7SS_signal
Motif
Other DBs
NCBI-ProteinID:
AEH10403
UniProt:
F8AXP7
LinkDB
All DBs
Position
complement(3669708..3674354)
Genome browser
AA seq
1548 aa
AA seq
DB search
MSDWDVLELDGDPTPGDPEAVRALATRLREQAERAESSTTRLRAIAANGGDLRMAGDYAP
RFTEALAELPDELAKLARAYHGCGDALSTYATTLTEAKTRAGGALRQGLDAHGRYQAALR
QVRTLLPPDREVALWPRAELSDGSISSATVGWESPDLAAQVRAAAQQGQVASADRLRARR
LADDAAELRGNAAHTCAREIEDALAGSGIKNKPWYEKVWNAVSAPFRSWDSFVELCRDVA
MVAGVVALFVSGPIGLALVGIALVAGATVFASTLAKYARGQASLGQLGLDALGLIPGARG
VTSAAGLARAAAGLARGVTHGQGVKLVGAALRGAGTALATRGRNMMSVARWGLSNPRANG
VEAVKRLVRLDPIDVATGDMVLTQTDAELPGVLPLPLSRTHVSSYRLGSWFGRSWASTLD
QRIEVDDNGVYFATADGMTLVYAAVSDADGPVLPVEGPRWPLTRGADGTYAISDPWQGRT
WHFTPLTPLTPPHGAAGEPRPSGGQRAAGGPVQWPLSALTDRNGNRIDFVYDGDDAPVEI
AHSGGYRIRVDTWRHRVVALALLGDGGNDPGGNDPGGNDPDGSATVLVRFGYTEAGDLAE
VVNSSGQPLHYDYDDDGRIVRWTDRNATEYRYAYDASGRCVATVGSGGCLTGQLRYDTER
RTTTVVDSLGHATIYHRNEALQVESVTDPLGNISRYTWDRYDRKLTETDPLGRTVRCTYD
AAGNLAEIARPDGGRTTARWNDLRLPVTLVEPDGDRWERSYDDRGNLTAVVDPAGARTLL
AYDDRGRLTAVTDALGHTRRVETDAAGLPVAVTDPLGAVTAYERDAFGRVVAVTGPIGEM
ARFGWTVEGRLAWHTRPDGATERWTYDGEGNLVEHVDAAGLVTRTEVTHFDLPAARTGPD
GARLEFSYDTELRLVAVTNPQGLVWRYDYDPAGNLARETDFNGRALAYGYDAAGQLVERT
NGAGQTVRFTRDPLGNVIEKHSASGVTTFTYDAAGRVTRATNPDADCVFQRDALGRVLAE
TCNGRTLTSAYDVLGRRVRRVTPSGAASVWEYGPNDLPLSLRIAGRTLRFTHDEAGREVR
RSLDTGVVLAQAWDVNDQLLSQTVTAGGPGTARQARLLQRRDYSYSPDGYVTEIDDMLAG
LRRFDLDPARRVTAVHGANWSERYAYDTAGNITDASWPVPTQRDGRDGEHEAAQGGREYT
GTLIRRAGSVRYEHDGQGRVTLRQHKRLSAKPRTWRYTWDADDRLTAVTTPDSQRWRYLY
DPFGRRIAKQRAADSGTGDAGGVAERVDFTWDGAVLAEQSHVTAGDPTGRITTWDWEPGS
FRPLTQSERRPSDGADQAWFDARFHAIVTDLVGTPTELIGPDGNLAWRNRTTLWGASPQP
ADGAVDCPLRFPGQYHDQETGAHYNYFRYYDPETARYDSNDPLGLAPAPNPHTYVPNPLG
WLDPLGLAPYDVARMRHYTNVRGKEGILSSGVVRASDQNKVFLVPAKGKPLSPRDAEEYL
GIARGRGRHVLEFDVPADRLSKDYNPTMNIHEWTVTGDIAVTDIKVVR
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgactgggacgtcctggagctggacggtgatccgaccccgggcgacccagaagcg
gtgcgggccctggccacccggctacgggagcaggccgagcgagccgagagctccaccacc
cgcctgcgtgcgatcgcggccaacggcggtgatctgcggatggccggtgactacgccccc
cggttcaccgaggcgctcgccgaactgcccgacgagctggccaagctcgcccgtgcctac
cacggctgcggcgatgcgctgtccacctatgcgacgactctgaccgaggcgaagacacgc
gcgggtggcgcgctgcggcagggcctggacgctcacggccgctaccaggcggcgttgcgt
caggtccggacgctgctgccgcccgaccgggaggtggcgttgtggccgcgggccgagctc
agcgacggctcgatcagttccgcgacggtgggctgggagtcccccgatcttgccgcgcag
gtgcgggcggccgcgcagcaggggcaggtggccagcgccgaccggctgcgggcccggcgg
ctggccgacgacgccgccgagttgcgcgggaacgcggcgcacacctgcgcccgcgagatc
gaggacgcgctggccggcagcgggatcaagaacaagccgtggtacgagaaggtgtggaac
gccgtgtccgcgccgttccggtcctgggacagcttcgtggagctgtgtcgtgacgtcgcc
atggtcgccggtgtggtcgcgttgttcgtctccgggccgatcgggctcgcgctcgtcggc
atcgccctggtggccggcgccaccgtctttgccagcacgctggcgaagtacgcgcgtggc
caggcgtcgttgggccagctcggtctggacgcccttggtctcatcccgggcgcgcggggc
gttaccagtgccgccgggctggcacgtgccgccgctggtctggcgcgtggggtcacgcac
ggccaaggggtgaagctcgtcggcgccgcgctgcgcggcgccggcacggcgctggccacc
cgtgggcgcaacatgatgtcggtagccaggtgggggctttccaacccgcgggcgaacggg
gtcgaggccgtcaagcgcctggtccggctggacccgatcgacgtcgcgaccggtgacatg
gtgctgacccagaccgacgcggagctgcccggcgtgctgccgttgccgctgtcccggacg
cacgtctcctcctatcggctgggcagctggttcggccgttcgtgggcgtccaccctcgac
cagcggatcgaggtggacgacaacggggtctatttcgccaccgcggacggcatgaccctg
gtgtacgcggcggtctcggacgccgacgggccggtgctgccggtggaggggccgcgctgg
cccctgacccgcggcgcggacgggacatacgcgatcagcgatccgtggcaggggcggacc
tggcatttcaccccgctcaccccgctcaccccgccgcacggggcagccggcgagccgcga
ccgtccggtgggcagcgggcggccggcggacccgtccagtggccgctgagcgcgttgacc
gaccgcaacggcaaccgcattgatttcgtttacgacggggatgacgctcccgtcgagatc
gcccattccggcggttaccggatccgggtggacacctggcgacaccgggtcgtcgcgctg
gccctgctcggtgacggcggcaacgaccccggcggcaacgatcccggcggcaacgatccc
gacgggtccgcgaccgtgctggtgcggttcggctacaccgaggccggtgaccttgccgag
gtcgtcaactcctcgggccagccgctgcactacgactacgacgacgacggtcgcatagtg
cgctggacggaccgcaacgccaccgaataccggtatgcctacgacgcctccggccggtgt
gtggccacggtgggcagcggcggctgcctgaccggccagctacggtacgacaccgagcgg
cgcacgaccaccgtcgtcgactcgctgggccacgcgacgatctaccatcgcaacgaggcg
ctgcaggtcgagtcggtcaccgacccgctcggcaacatcagccgttacacctgggacagg
tacgaccgcaagctcaccgagaccgacccgctgggccgtaccgtccgctgcacctacgac
gccgccggcaacctggcggagatcgccaggccggatggtggtcgaacaaccgcgcggtgg
aacgatctgcggctgccggtgaccctcgtggaaccggacggcgaccgctgggaacgctcc
tacgacgaccgcggcaacctgaccgccgtggtcgacccggccggtgcccggacgctgctc
gcctacgacgaccgcggccggctcacggccgtcaccgacgcgctcgggcacacccggcgg
gtcgagaccgacgccgccggcctgcccgtcgcggtgaccgacccgctcggcgcggtcacc
gcctacgagcgggacgccttcggccgagtggtcgcggtgaccggcccgatcggtgagatg
gcccggttcggctggacggtcgaaggcaggctggcctggcacacccggccggacggggcc
accgaacgctggacctacgacggggagggcaatctcgtcgagcacgtggacgcggccggg
ctggtgacccgcaccgaggtcacgcatttcgacctgccggcggcgcggaccggcccggac
ggggcgcggctggagttctcctacgacaccgagctgcggctggtcgcggtcaccaacccg
cagggcctggtctggcggtacgactacgatccggcggggaacctcgcccgggagaccgac
ttcaacgggcgggcgctggcctacgggtatgacgccgccggccagctcgtcgaacgcacc
aacggcgccgggcagaccgtgcgcttcacccgcgacccgctcggtaacgtgatcgagaag
cacagcgcgagcggtgtgacgacgttcacctacgacgcggcgggacgggtgacacgggcg
acgaaccccgacgccgactgcgtgttccagcgggacgccctcggccgcgtgctggccgag
acctgcaacggccgtacgctcacctcggcctatgacgtgctcggccggcgggtacggagg
gtgaccccgtccggggcggccagcgtctgggagtacggcccgaacgacctgccgctgtcc
ctgcgcatcgccggtcggaccctgcgtttcacccacgacgaagccggccgggaggtacgg
cgcagcctggacaccggtgtcgtgctggcgcaggcctgggacgtcaacgaccaactgttg
tcgcagaccgtgaccgcgggcgggccggggaccgcgcgacaggcacggctgctccagcgc
cgcgactacagctacagtccggacggctacgtcaccgagatcgacgacatgctcgccggc
ctgcgccggttcgacctcgacccggctcggcgggtcaccgccgtccacggggcgaactgg
tccgagcgctacgcctacgacaccgcgggcaacatcaccgacgcgtcctggccggtgccc
acacagcgcgacgggcgcgacggggagcacgaggccgcgcagggcggacgtgagtacacc
ggcacactgatccgccgcgcgggtagcgtccgttacgagcacgacggccagggacgggtg
accctgcgccagcacaagcgactgtcggcgaagccgcgtacctggcgttacacctgggac
gccgacgaccgcctgaccgccgtgaccacccccgacagccagcgctggcgctacctgtac
gacccgttcggccggcgtatcgccaagcagcgtgccgccgacagcggcaccggtgatgct
ggtggggtggccgagcgggtcgacttcacctgggacggcgccgtactcgccgagcagagc
cacgtcaccgcgggcgacccgacgggccgtatcaccacctgggactgggagcccggtagc
ttccgccctctcacccagtccgaacgccgcccatccgacggcgcggaccaggcatggttc
gacgcccggttccacgccatcgtcaccgatctcgtcggcacccccaccgagctgatcggc
ccggacggcaacctcgcctggcgcaaccgaaccaccctctggggcgccagcccacagccc
gccgacggcgccgtcgactgcccgctacgcttccccggccagtaccacgaccaggaaacc
ggcgcccactacaactacttccgctactacgaccccgaaaccgcccgctacgactccaac
gacccgctcggcctggcccccgcccccaacccccacacctacgtccccaaccccctgggc
tggcttgaccccctgggacttgcgccatacgacgtcgccaggatgcggcactacaccaac
gtcagaggtaaagaagggattctttcatcgggagtagtcagagccagcgatcagaacaag
gtttttctggttccggccaagggcaagccgttgagtccccgtgacgcggaggagtatctt
ggtattgcgcgtgggcgtggtcggcacgtcttggagttcgatgttccagcggatcggttg
agtaaagattacaaccccacaatgaatattcatgaatggaccgtaaccggggatatcgcg
gtcaccgacatcaaggtggtgcgctag
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