Candidatus Protofrankia datiscae: FsymDg_3308
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Entry
FsymDg_3308 CDS
T01530
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FsymDg_3308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_3308
Enzymes [BR:
fsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FsymDg_3308
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FsymDg_3308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Ad_Cy_reg
Motif
Other DBs
NCBI-ProteinID:
AEH10612
UniProt:
F8AV56
LinkDB
All DBs
Position
complement(3918255..3920855)
Genome browser
AA seq
866 aa
AA seq
DB search
MPEQLGVFVGLDAAAGPMAGLAAGPAAGTAPPADGVAAAGVDVGVPAPARGARSPRPASS
RVGTGRKTAAAVGAPVTASELPVARVAVDVGHAHLDRPFDYLVPRQWAQEAVPGARVRVR
FAGRLLDGFILERCERSEHTGRLAFLARVTSAEPVLAPDIAELARAVADRYAGTVADVLR
LAVPPRHARVEKETRAQKKPPVSSTSPAGPPAPADPPARPTAAGPAVDGATAAGTAVAGS
TAVAVRVGLSGVWADYPDGERMLAALRAGGSPRAVWWALPGPSSWPAMVAAAVAATVASA
RGAVVVVPDHRDVERVAAALMDVLDPDDFVALRADLGPAERYRRFLAVRRGQARVVVGTR
AAVFAPVTDLGLIVVWDDGDDLHAEPRAPYPHVRDVAVLRARQQRAALIVGGWSPSTDAE
AMVRVGWASALIAPRPVVRAVAPRVEATGSQVEQARDPAARAARLPSLAWRAARDALAAG
APVLVQVPRRGYQPSLACAGCRRPARCRHCGGPLGRHGGSGPPTCGWCARVAVGVRADAH
HPPPPPGAAPPPGAADAGGRPTRPSATAPVRPSVPVPAGSPVPAPVPAEAGWRCPYCRDV
RFRASVVGDRRTAEELGRAFPGAVVRTSGRDGVLATVAAAPALVVATPGAEPVADGGYGA
VLLLDTWALLGRPDLRAAEETLRRWCAAAALARPAADGGRVVVAADAGLAVVQALTRWDP
AWFVRREADERAALGFPPATRVVAVEGSAGAVADLVAAARLPAGADVLGPVPLEEVDRPA
GAGTAGRPAPAGETGRSVPAGRAARPAPVGDADASELAGQRWERVLVRVPRAQGQQLAAA
LKAARGVLDARRSPPVRVIPDPITLL
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacaacttggggtcttcgtcgggctggacgccgcagccggcccgatggctggt
ctggccgccgggccagcggctggcacggccccaccggcggacggggtggccgccgcgggg
gtggatgtcggcgtgccggcgcccgctcggggtgcccgctcgcctcgcccggcgtcctcg
cgagtgggtactggcaggaagaccgccgccgctgtaggggcgccggtcaccgcgagcgag
ctgccggtcgcccgggttgcggtggacgtcgggcacgcccatctggaccggccgttcgac
tacctggtgccgcggcagtgggcgcaggaggccgtccccggcgctcgggtccgggtccgg
ttcgccggccggctgctggacggtttcatcctcgagcgctgtgagcgttccgagcacacc
ggccggctcgcctttctggccagggtcacctccgcggagccggtcctcgcccccgacatc
gccgagctggcccgggcggtggccgaccgttacgcgggcacggtcgccgacgtgctccgg
ctcgccgtcccaccccggcacgcccgagtggagaaggagaccagggcacagaagaagcct
cccgtcagctcgacgtcccccgccggcccgccggcgccggccgacccaccggcacggccg
acggcggccgggccggcggtggatggggctacagcagctgggacggcggtggctgggagc
acggcggtggcggtgcgggtggggctgtccggtgtctgggcggactatcccgacggggag
cggatgctggcggccctgcgtgccggcggcagcccccgggccgtgtggtgggcgcttccc
gggccgtcctcctggccggcgatggtcgccgcggccgtggccgccacggtggcgtccgcc
cgcggggcggtggtcgtcgtgcccgaccaccgtgacgtcgagcgggtcgccgccgcgctg
atggacgtgctcgacccggacgattttgtcgcgctgcgtgccgatctcggcccggccgaa
cgctaccggcgcttcctcgccgtccgccgcgggcaggctcgggtggtcgtgggaaccagg
gctgccgtgttcgctccggtcacggacctcgggctgatcgtcgtctgggacgacggggac
gacctgcacgccgagccgcgtgccccctatccgcacgtccgggacgtcgccgtactgcgt
gcccgccagcaacgggcggcgctgatcgtcggtggctggtcgccgtcgaccgatgccgag
gcgatggtgcgcgtcggctgggcatcggccctgatcgcgccgcgcccggtggtccgggct
gtcgcgccccgggtcgaggcgacgggctcgcaggtcgaacaggcccgggatccggcggcg
cgggcggcgcggctgccgtcgctggcctggcgtgccgcgcgggacgcgctggccgcgggc
gcgccggttctcgtgcaggtgccgcggcgcgggtaccagccgtcgctggcctgcgcgggc
tgccgacggccggcccgctgccggcactgcggggggccgctgggacgccacggcgggtcc
gggccgccgacctgcggctggtgcgcgcgggtggcggtcggcgtgcgggccgacgcccac
cacccgccgccgccgcccggggctgccccgccgcccggggccgctgacgccggcggacgg
cccaccaggccttccgcgacggccccggtcagaccttcggtgccagtcccggccggatcc
ccggtgccggcgccggtgccggccgaggccgggtggcggtgcccgtactgccgggacgtc
cgcttccgcgcgagcgtcgtcggggacaggcgcaccgccgaggagctgggacgcgccttc
ccaggggccgtcgtgcgcacctccggccgggatggcgtgctggcgaccgtcgcggcggcg
cccgcgctggtggtggccaccccgggggccgagccggtggccgacggcgggtatggcgcg
gtcctgctgctcgacacgtgggcgctgctgggccgcccggatctgcgcgcggctgaggag
acgctgcgccggtggtgcgcggcggcggcgcttgccaggcccgcggcggacggcggccgg
gtcgtcgtcgccgccgacgccgggctcgcggtggtccaggcgctgacccgctgggatccg
gcctggttcgtccggcgggaggcggatgagcgggctgccctcggcttcccgccggccacc
cgcgtcgtcgctgtcgagggcagcgccggcgcggttgccgacctggtcgcggcggcgcgg
ctgcccgccggcgccgacgtgctcggcccggtcccgctggaggaggtggaccgcccggcc
ggcgccgggacggcgggccggcccgctcccgctggtgagacaggtcgatccgtccccgcc
gggcgggcggcccggcctgctcccgtcggggacgcggacgcgtcggagcttgccgggcag
cgatgggaacgtgttctggtgcgggttcccagagcgcaggggcagcagctcgcggccgcg
ctcaaggcagcccgcggcgtgctcgacgcccgccgttccccaccggtgcgggtcatcccc
gatccgatcactttgctgtga
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