Candidatus Protofrankia datiscae: FsymDg_3618
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Entry
FsymDg_3618 CDS
T01530
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fsy03009
]
FsymDg_3618
Enzymes [BR:
fsy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FsymDg_3618
Ribosome biogenesis [BR:
fsy03009
]
Prokaryotic type
ribosomal protein modification factors
FsymDg_3618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AEH10897
UniProt:
F8B397
LinkDB
All DBs
Position
complement(4264510..4265967)
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AA seq
485 aa
AA seq
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MPDRPVRRVALITLGCARNDVDSEELAARLGGDGWAVVDDPVTADAVVVNTCGFVDVAKK
DSIDTLLAAADLRDAATDAGGPKAVVAVGCLAERYGRQLADSLPEADAVLGFDAYPTLGS
HLDAVLRGEKPAAHTPRDRRTLLPITPVDRQAERTERAGPASGPPVLRQRLLGGPVASLK
ISSGCDRRCAFCAIPTFRGAHVSRPPQDVLAEAEWLAGQGVRELVLVSENSTSYGKDLGD
LRALEKLLPQLAAIAGVVRVRAVYLQPAEVRPSLLETVLTTPGVAPYLDLSFQHASPSVL
RRMRRFGGADAFLDLLARARALAPDLGARSNVIVGFPGETRADVALLERFLTDADLDAVG
VFGYSDEDGTEAATLPGKVTPATVRRRQARVTDLVEQLTAARAQQRLSSVVEVLVEEVAG
GLAHGRAAHQQPEVDGACTVRLPAAEAARVRVGDLVSAKVVASEGVDLVAELLDIVDPVT
VDPVV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgatcgtcccgttcgccgtgtcgcgctgatcacactgggctgtgcccgcaacgac
gtggactccgaggagctcgcggcgcggctcgggggggacggctgggccgtggtcgacgat
ccggtcaccgccgacgccgtggtggtcaacacctgcggtttcgtcgacgtcgccaagaag
gactcgatcgacacactgctcgccgccgccgatctgcgcgacgccgccacggacgccggg
ggcccgaaggccgtggtcgcggtcggctgcctggccgagcggtatgggcgacagctcgcc
gacagcctgccggaggccgacgcagtcctcggtttcgacgcctacccgacgctcggcagc
catctggacgcggtgctgcgtggcgagaaacccgcggcgcacactccgcgtgaccggcgg
accctgctgccgatcacaccggtcgaccgccaggcggagcggacggagcgggccgggccc
gcctccggcccgccggtcctgcgccaacgcctgctcgggggacctgtcgcgtcgttgaag
atttccagtggttgtgaccggcgctgcgcgttctgcgcgatccccacgttccgcggggcg
cacgtctcccggccaccgcaggacgtcctcgccgaggccgagtggctcgccggccagggc
gtgcgggaactcgtcctggtcagcgagaactcgacctcctacggcaaggacctcggggac
ctgcgggcgctggagaaactgctgccccaactggccgcgatcgccggtgtggtccgggtc
agagcggtgtacctgcagcccgccgaggtacgcccgtccctgctggagacggtgctgacg
actccgggagtcgccccctacctcgatctgtcgttccagcacgccagtccgtcggtgctg
cggcggatgcgccgtttcggtggcgcggacgccttcctcgatctgctggcgcgggcccgc
gcgctggccccggacctcggcgcccgctcgaacgtgatcgtcggcttcccgggcgagacc
cgggcggacgtcgcgctgctggagcgcttcctcaccgacgccgacctcgacgccgtcggg
gtcttcggatactccgacgaggacgggaccgaggcggccaccctgcccggcaaggtcacg
ccggccacggtacgccggcgccaggcgcgcgtgaccgacctggtcgagcagttgaccgcc
gcccgcgcgcagcagcggctctcctcggtcgtagaggtcctggtggaggaggtcgccggt
gggctggcacatggacgggccgcgcaccagcagcccgaggtcgacggagcgtgcacggtc
cgcctgccggcggccgaggccgcgcgggtgcgggtgggcgatctggtgagtgcgaaggtg
gtcgcgtccgaaggggtggacctggtcgccgagctcctcgacatcgtcgaccctgtgaca
gtcgaccctgtggtatga
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