Candidatus Protofrankia datiscae: FsymDg_3636
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Entry
FsymDg_3636 CDS
T01530
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsy03016
]
FsymDg_3636
Enzymes [BR:
fsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FsymDg_3636
Transfer RNA biogenesis [BR:
fsy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FsymDg_3636
Prokaryotic type
FsymDg_3636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
DUF3577
Motif
Other DBs
NCBI-ProteinID:
AEH10915
UniProt:
F8B3B3
LinkDB
All DBs
Position
complement(4289796..4290764)
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AA seq
322 aa
AA seq
DB search
MGAATVPGGAGGPVAEGPVVEGLVVVDKPSGWTSHDVVARSRRILRTRRIGHAGTLDPMA
TGVLVLGVGRGTRLLGHLALTNKVYEATVRLGVSTTTDDAEGEVLTVADDAVAQAVAADQ
PRLAAAMAALTGEIDQVPSAVSAVKVDGMRAYARVRAGQDVVLAARRVTVSRFDLLAHRG
TDLDVAVACSSGTYVRALARDLGAALGCGAHLTALRRTSVGPFGLAGAVTLDALAERGAA
ALRPLADAVGTLFPRRQVDADEACAISHGRRLPPFGVPDLYGVFGPAGELLALARDTAGA
GRPLVVFTPPSTPGPAEIPIGF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgccaccgtcccgggcggggcgggaggcccggtcgcggagggcccggtcgtg
gagggtctggtcgtggtcgacaagccgtcggggtggacctcacacgacgtggtcgcccgc
tcccgccggatactgcgcacccgccggatcggccatgcgggcacgctcgacccgatggcc
accggcgtgctggtgctcggggtgggccggggcacccggctgctcgggcacctcgccctg
acgaacaaggtctacgaggcgacggtacggctcggcgtctcgactaccaccgacgacgcc
gagggcgaggtgctcaccgtcgcggacgacgccgtcgcccaggcggtggccgccgaccag
ccgcgcctggccgccgccatggcggcgctcaccggtgagatcgaccaggtcccgtccgcg
gtcagcgcggtgaaggtcgacgggatgcgagcctacgcccgggtgcgcgccgggcaggac
gtcgtcctggcagcgcgccgggtgacggtgagccggttcgacctgctggcccaccgcggc
acggatctcgacgtggccgtggcctgctccagcggcacctacgtgcgggcgctggcccgc
gacctcggcgcggcgctgggctgcggcgcccacctcaccgccctgcggcggacgtcggtg
ggcccgttcggccttgccggggcggtcacgctcgacgccctcgccgagcggggggcagcc
gcgctgcgtccgctggccgacgctgtcggtacgctcttcccccgtcgccaggtcgacgcc
gacgaagcatgtgcgatatctcatggccgccggctgccgccgttcggcgtgcccgacctc
tacggtgtcttcggccctgctggtgagctgctcgccctggctcgggacaccgcgggggcc
ggccggccgttggtggttttcacgccgccttccacccctgggcccgcggagatcccgata
ggcttttga
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integrated database retrieval system
