Candidatus Protofrankia datiscae: FsymDg_3644
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Entry
FsymDg_3644 CDS
T01530
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsy03021
]
FsymDg_3644
03009 Ribosome biogenesis [BR:
fsy03009
]
FsymDg_3644
Transcription machinery [BR:
fsy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FsymDg_3644
Ribosome biogenesis [BR:
fsy03009
]
Prokaryotic type
rRNA transcription factors
FsymDg_3644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_2
KH_NusA_C
S1
Motif
Other DBs
NCBI-ProteinID:
AEH10922
UniProt:
F8B3B7
LinkDB
All DBs
Position
complement(4296350..4297438)
Genome browser
AA seq
362 aa
AA seq
DB search
MKLDVAALRGIEREKDIAFDTLVEAIETALLTAYRHTDGAAADARVVIDRTSGHVAVYAR
ETSLDGMTREWEDTPADFGRIATMTAKQVIMQRLREAQQEITYGQYADREHEVVSGVVQH
HEQRAGSKVVLVDLGTIEGVLPPAEQVPGERFEHGDRIKCYVVSVTRGVHGPTVTLSRTH
PELVKGLFRMEVPEVADGTVEIAAIAREAGHRSKIAVRSTVAGVNPKGACIGPMGARVRA
VMAELHGEKIDIVDWSADPAAFVGNALSPARVARVEVADPAVRAARVVVPDYQLSLAIGR
EGQNARLAARLTGWRIDIHSDTEGAGDPVARDGAEAGARRAVSPSLPRRSPATGGPSSGA
TR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgacgtggcggcgttgcgcggcatcgaacgtgagaaggacatcgccttcgac
accctggtggaggcgatcgagaccgcgctgctgaccgcctaccggcacaccgacggggcg
gccgcggacgctcgggtggtcatcgaccggacgtccgggcacgtggcggtgtacgcccgc
gagacctccctggacgggatgacgcgggaatgggaggacactcccgcggacttcggccgg
atcgccacgatgacggccaagcaggtgatcatgcagcggctgcgcgaggcccagcaggag
atcacctacgggcagtatgccgaccgggagcacgaggtcgtctccggcgtcgtccagcac
cacgagcagcgggccgggtcgaaggtcgttctggtcgatctcggcaccattgagggcgtg
ctgccgcccgccgagcaggttcccggcgaacgttttgagcacggggaccgcatcaagtgt
tatgtcgtcagcgtcacccggggcgtgcacggccccacggtgaccctgtcgcggacccat
ccggagctggtcaagggcctgttccggatggaggtgccggaggtggccgacggcacggtg
gagatagccgcgatcgccagggaggcgggccaccgcagcaagatcgcagttcggtcgacg
gtggccggggtgaacccgaagggcgcctgcatcggcccgatgggagcgcgggtacgggcc
gtcatggccgagctgcatggcgagaagatcgacatcgtcgactggtccgctgacccggcc
gcgttcgtcggtaacgcactgtcaccagcgcgggtggcccgggtcgaggtcgccgatccc
gccgttcgcgcggcgcgggtggtcgtgccggactaccagctctccctcgccatcggccgg
gaagggcagaacgcccggttggcggcacgcctgaccgggtggcgcatcgacatccactcg
gacacggaaggcgccggtgacccagtggcacgggatggtgccgaggcgggtgcccggcgg
gccgtgtcgccgtcccttccccggagatctcccgctaccggcggcccctcgtcaggtgca
acgagatag
DBGET
integrated database retrieval system
