Candidatus Protofrankia datiscae: FsymDg_3705
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Entry
FsymDg_3705 CDS
T01530
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fsy03032
]
FsymDg_3705
03036 Chromosome and associated proteins [BR:
fsy03036
]
FsymDg_3705
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_3705
DNA replication proteins [BR:
fsy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FsymDg_3705
Chromosome and associated proteins [BR:
fsy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FsymDg_3705
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FsymDg_3705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
HU-HIG
HU-CCDC81_euk_2
PEP-utilisers_N
Rpf1_C
SSPI
Lmo2446-like_N
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AEH10982
UniProt:
F8B472
LinkDB
All DBs
Position
complement(4356331..4356627)
Genome browser
AA seq
98 aa
AA seq
DB search
MNKSQLVDRIAQQIEGGRSNATKAVDAVFDAIQEAVSAGEKVTITGFGVFERVERAARTG
RNPATGEPVHVAASVVPKFRPGSEFKASVSASEDPQDN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcccagttggttgatcgaatcgctcagcagatcgagggcgggcggtcgaac
gcgaccaaggccgtcgatgccgtcttcgacgcgattcaggaggccgtctccgccggtgag
aaggtgaccatcacggggttcggtgtcttcgagcgcgtcgagcgggcggctcgtaccggt
cgtaaccccgcgacgggtgagccggtgcacgtcgccgcctcggtcgtgccgaagttccgg
cccggttcggaattcaaggccagcgtctccgccagcgaggatccgcaggacaactga
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