Candidatus Protofrankia datiscae: FsymDg_3906
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Entry
FsymDg_3906 CDS
T01530
Name
(GenBank) hypothetical protein
Organism
fsy
Candidatus Protofrankia datiscae
Brite
Glycosaminoglycan binding proteins [BR:
fsy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
FsymDg_3906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Miracidia_Ag_8I
Motif
Other DBs
NCBI-ProteinID:
AEH11181
UniProt:
F8AUX8
LinkDB
All DBs
Position
complement(4588748..4591684)
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AA seq
978 aa
AA seq
DB search
MPTHGLGASDDDAWAWDAVAGAWRPSTAAGDAGGPVTGPADRSGASGRRADDFFAVERVG
EADDRSEPSFPPVPDRSGAQDPTGQGWRDRPFPAPDPFDVSASHERPALPAYPFQPASPF
QPPPPDHPRPGWLPGGDDSAMGTTTGGYGGGRWGLSVDGSDRAGAAQRDTGPPVAADGFA
GYGGPAGQSPAGQGQSPTGQGPVGQSPAGQGAGHPWQSAPGPANGNGTGPDGYQPGVLRG
FAPHYPDARGSTDGYRTRPRDDGPASPPAGGAFSFGGQSDQRLFDTGAPGPDGRRPGGPQ
PLPGRASPAALPPAALPPAGMPSAGMPSDDGFGGSAGSPPARGPAGYGAPGSAGNGVPNP
NGVGDRYGSDHPANGYGLAGHQAGYPPLMGTDRELPARQPDTTGPGDGSTSYLMGGSFRA
AQPRDRGRVPPAGPNPPPPDRAGPPDAGPAATAGSPAPSGYGAGGYPGSGAARALVRGAG
VNDDAPVAPGTSRPTAGRVDGGNDRAVLLPPTYRDPAAATTAESSVPARPHPRTAPRPPS
AIPGARTPGGGLPGEAAFADPAAAASSAAGSMERTDIVPRVTDAARPRTSRDGMPSSPAV
PPGVLGQSLAEMTATLSRIGSVPDTGSRDAGSRDAGSRDAGSRDAGSRDAGSRDIGSRDA
GSRDAGSRDIGSRDIGSRDAGSRDTGPDDDDGGWKPSTSVRKKVGRPGTATARVPSPGGA
STDTGARGPEQHSTASGAAKRPAVRLSSRPDSRRGGPDPGDDIDDVDDVDDVDDVDDDGS
GGPGSGLLARYRRGWTGPLIVAVLVSLVAVGLYALLSGGAEDLPVGAPEDPADPGVTAAA
SSAGGAPTPATSNPDAAAGRALVDGTYRCYRTADGDQPADGAASADNRNSQASAALPNKF
VVPRESGSYRWDDQQGTYSITKNSLSTDTVIFTDVRFADGPLKDIKALFINRVGAGDAGK
DGAFLTFKDGSNRWCAIN
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccacgggctcggggcgagcgacgatgacgcgtgggcgtgggacgccgtcgcc
ggggcgtggcgtccatcgacggcagccggtgacgcgggcggcccggtgaccggccccgcg
gaccgttccggagcgtcgggccggcgtgcggacgacttcttcgcggtcgagcgggtcggg
gaggctgacgaccgctccgagccgtccttcccgccggttccggacaggtccggcgcccag
gatccaaccggccaggggtggcgcgatcgtcccttccccgctcctgacccgttcgacgtc
tccgccagtcatgagcggccggccctgcccgcctacccgttccagccggcttctccgttc
caaccgcccccgcccgaccacccgcggcccggctggctgccgggcggtgatgattctgcg
atgggcacgacgaccggcggctacggcggtgggcgctgggggctgtccgtggatggcagc
gatcgtgccggcgccgcccagcgcgacaccggcccgcccgtcgccgcggacggattcgcc
ggttatggcggccccgccggccagagccccgccggtcagggccagagccccaccggccag
ggtccggtgggccagagccccgcgggtcagggcgcaggtcatccctggcagtccgctccg
gggccggcgaacgggaacggcaccgggccggacggctatcagcctggcgtcctgcgcggt
ttcgctccgcattaccccgatgcccgtggttccaccgacggttatcggacccgtccgcgt
gacgacgggcccgcctccccgcccgcgggtggcgctttctcctttggtggtcagtccgac
cagcgtctgttcgacacgggcgcccccgggccggacggccgtcggcccgggggcccgcag
ccgttgcccggccgggcgtcaccggccgccctaccaccggccgccctgccgccggcgggt
atgccgtcggcgggtatgccgtcggacgacggtttcggggggagcgccggttccccgccg
gcccgtggcccggccgggtacggcgcccctggctccgccggtaacggcgtgccgaacccc
aacggcgttggggaccgttacggaagcgaccatccggcgaacggttacgggttggcgggc
caccaggccggctacccaccgctcatgggcactgatcgtgagcttccggcccgtcaaccg
gacaccaccgggccgggagacggatcgacttcctacctgatgggcggctcgttcagggcg
gcacagccccgtgatcgcggacgggtacctcccgctgggccgaacccgccgcctcccgat
cgggccggccccccggacgcagggccggccgcgacagccggcagcccggctccgagcggc
tacggggcaggcggatatcccggttccggggccgccagagccctcgttcgtggtgccggc
gtgaacgacgatgcaccggttgctcctggcacatcccggccaactgccgggagagtggac
ggcggcaacgaccgggccgtgcttctcccgccgacctaccgggacccggccgcggccacc
acggccgagtcgtccgttcccgcccggccgcacccacgtaccgctcccaggccgccgtcg
gcgatacccggggccaggacgcccgggggcggtctgccgggcgaggcggccttcgcggac
ccggccgccgcggcgtcctccgccgccggatcgatggagcgcaccgacatcgtgccacgg
gtcaccgacgccgcacggccgaggacgtcgcgtgacggtatgccgtcatctccggccgtg
ccgcccggggtgctgggacagtcgctggcggagatgaccgcgacgctgtcgaggatcggg
tccgtgccggacaccggctcgcgtgatgccggctcgcgtgatgccggctcgcgtgatgcc
ggctcgcgtgatgccggctcgcgtgatgccggctcgcgtgacatcggctcgcgtgatgcc
ggctcgcgtgatgccggctcgcgtgacatcggctcgcgtgacatcggctcgcgtgatgcc
ggctcgcgtgacaccggtcccgatgacgacgacgggggctggaagccgtccacttctgtc
cgtaagaaggtgggccggccgggtacggcgacggcgcgggttccctccccgggtggtgct
tccacggacaccggggcgcgggggccggagcagcactcgacggcgtccggggccgcgaaa
cggccggccgtccgactgtccagccggccggacagccggcgcggtgggccggatcccggt
gacgacatcgacgatgtggacgacgtcgacgacgtcgacgacgtcgacgacgacggcagc
ggcggccccggctcggggctgctggcgcgttatcggcgtgggtggaccggcccgttgatt
gtcgcggtgctggtgtccctggtcgcggtcgggctgtacgccctgctgtcgggcggggcg
gaggatcttcccgtgggggctccggaggacccggcggatcccggcgtcaccgccgcggcg
tcctcggccgggggcgcgccgacgccggccacgagcaatccggacgccgcggccggtcgg
gcgctggtcgacggcacctaccgctgctatcggacggccgacggcgaccagccggccgac
ggggctgcctcggccgacaaccggaattcccaggcgtccgcggcactgccgaacaagttc
gtcgtgccacgcgagagcggtagctaccgctgggatgaccagcagggtacctactcgatc
acaaagaacagtctgagtaccgataccgtgatttttaccgacgtccggttcgccgacggt
ccgctcaaggacatcaaggcgctgttcatcaaccgggtgggcgctggcgacgccgggaag
gacggcgctttcctgaccttcaaggacggatcgaaccggtggtgtgcgatcaattag
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